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4. Fergus Shanahan

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Biography

Fergus Shanahan is Professor and Chairman of the Department of Medicine at University College Cork (UCC), National University of Ireland.  Born and educated in Dublin, he attended medical school at University College Dublin where he graduated with honours in 1977 and was awarded a gold medal in medicine from the Mater University Hospital.  After internship and residency in internal medicine in Dublin, he did a two-year fellowship in clinical immunology at McMaster University in Ontario, Canada, followed by a two-year fellowship in gastroenterology at the University of California, Los Angeles (UCLA).  After completion of his fellowship at UCLA, he was appointed to the faculty there, rising to the rank of Associate Professor before making the decision, in 1993, to return to his native Ireland.  Together with colleagues from several departments and different faculties within University College Cork and Teagasc (a research agency of the Irish Ministry of Food and Agriculture), Dr. Shanahan led a team of clinicians, clinician-scientists, and basic scientists to successfully compete for seed funding from Science Foundation Ireland to create a multi-disciplinary research center, the Alimentary Pharmabiotic Centre (APC), which was established in 2003 and which investigates host-microbe interactions in the gut in health and disease.  Under Dr. Shanahan’s directorship, the center now has a membership of 170 staff, scientists, and students and has expanded its funding and research base by securing research alliances with indigenous and multinational companies within the food and pharmaceutical sectors. The APC was granted institute status in 2013 and has been re-named APC Microbiome Ireland. Dr. Shanahan has published more than 500 scientific papers and several on the medical humanities and has co-edited several books.  He has several patents and is a co-founder of three university start-up companies which continue as a source of over 45 high tech jobs in the Cork region. He is a Fellow of the Royal College of Physicians in Ireland, Canada, and the United Kingdom as well as of the American College of Physicians.  He served as President of the Irish Society of Gastroenterology from 2007-2009, was named to the “Irish Life Science 50” a list of the top 50 Irish and Irish Americans in the life science industry and has received the Irish Society of Immunology biennial medal and public lectureship award. He was the first recipient of the Hektoen international medical humanities grand prix for an essay entitled ‘Waiting’.  In 2013, Science Foundation Ireland named him as its Researcher of the Year. He was awarded a DSc for published work on mucosal immunology by the National University of Ireland in 2014. He was also acknowledged with an honorary DSc. from his alma mater, University College Dublin, in 2015. The Royal Irish Academy (RIA) honoured him with a gold medal for contributions to the life sciences (2016) and he was elected to membership of the RIA in 2017. His interests are in mucosal immunology, gut microbiota, inflammatory bowel disease, and most things that affect the human experience.
PUBLICATIONS: for an accurate list, please log onto PubMed and enter Shanahan F (orhttp://www.ncbi.nlm.nih.gov/pubmed/?term=Shanahan+F)

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Research Interests

Gastrointestinal immunology Host-bacterial interactions within the gut‍

Publications

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Peer Reviewed Journals

	Year	Publication
	(2014)	'A Functional Approach Reveals a Genetic and Physical Interaction between Ribonucleotide Reductase and CHK1 in Mammalian Cells' Taricani, L.,Shanahan, F.,Malinao, M. C.,Beaumont, M.,Parry, D. (2014) 'A Functional Approach Reveals a Genetic and Physical Interaction between Ribonucleotide Reductase and CHK1 in Mammalian Cells'. Plos One, 9 (1) [Details]
	(2014)	'The utilisation and diagnostic yield of radiological imaging in a specialist functional GI disorder clinic: an 11-year retrospective study' Breen, M.,Murphy, K. P.,O'Neill, S. B.,O'Donovan, J. P.,McWilliams, S.,Desmond, A. N.,Shanahan, F.,Quigley, E. M.,Maher, M. M. (2014) 'The utilisation and diagnostic yield of radiological imaging in a specialist functional GI disorder clinic: an 11-year retrospective study'. Eur Radioleur Radiol, 24 (12):3097-3104 [Details]
	(2014)	'Regulation of host weight gain and lipid metabolism by bacterial bile acid modification in the gut' Joyce, S. A.,MacSharry, J.,Casey, P. G.,Kinsella, M.,Murphy, E. F.,Shanahan, F.,Hill, C.,Gahan, C. G. (2014) 'Regulation of host weight gain and lipid metabolism by bacterial bile acid modification in the gut'. Proceedings of The National Acadamy of Sciences, 111 (20):7421-7426 [Details]
	(2014)	'The identification of novel 5'-amino gemcitabine analogs as potent RRM1 inhibitors' Labroli, M. A.,Dwyer, M. P.,Shen, R.,Popovici-Muller, J.,Pu, Q.,Wyss, D.,McCoy, M.,Barrett, D.,Davis, N.,Seghezzi, W.,Shanahan, F.,Taricani, L.,Beaumont, M.,Malinao, M. C.,Parry, D.,Guzi, T. J. (2014) 'The identification of novel 5'-amino gemcitabine analogs as potent RRM1 inhibitors'. Bioorg Med Chembioorg Med Chem, 22 (7):2303-2310 [Details]
	(2014)	'Probiotics in obese pregnancy do not reduce maternal fasting glucose: a double-blind, placebo-controlled, randomized trial (Probiotics in Pregnancy Study)' Lindsay, K. L.,Kennelly, M.,Culliton, M.,Smith, T.,Maguire, O. C.,Shanahan, F.,Brennan, L.,McAuliffe, F. M. (2014) 'Probiotics in obese pregnancy do not reduce maternal fasting glucose: a double-blind, placebo-controlled, randomized trial (Probiotics in Pregnancy Study)'. The American Journal of Clinical Nutrition, 99 (6):1432-1439 [Details]
	(2014)	'Exopolysaccharide-Producing Probiotic Lactobacilli Reduce Serum Cholesterol and Modify Enteric Microbiota in ApoE-Deficient Mice' London, L. E.,Kumar, A. H.,Wall, R.,Casey, P. G.,O'Sullivan, O.,Shanahan, F.,Hill, C.,Cotter, P. D.,Fitzgerald, G. F.,Ross, R. P.,Caplice, N. M.,Stanton, C. (2014) 'Exopolysaccharide-Producing Probiotic Lactobacilli Reduce Serum Cholesterol and Modify Enteric Microbiota in ApoE-Deficient Mice'. Journal of Nutrition, 144 (12):1956-1962 [Details]
	(2014)	'Concomitant exposure to ovalbumin and endotoxin augments airway inflammation but not airway hyperresponsiveness in a murine model of asthma' Mac Sharry, J.,Shalaby, K. H.,Marchica, C.,Farahnak, S.,Chieh-Li, T.,Lapthorne, S.,Qureshi, S. T.,Shanahan, F.,Martin, J. G. (2014) 'Concomitant exposure to ovalbumin and endotoxin augments airway inflammation but not airway hyperresponsiveness in a murine model of asthma'. Plos One, 9 (6) [Details]
	(2014)	'Editorial: probiotics and IBS - where are we now?' Moran, C.,Shanahan, F. (2014) 'Editorial: probiotics and IBS - where are we now?'. Alimentary Pharmacology & Therapeutics, 40 (3) [Details]
	(2014)	'Gut microbiota and obesity: role in aetiology and potential therapeutic target' Moran, C. P.,Shanahan, F. (2014) 'Gut microbiota and obesity: role in aetiology and potential therapeutic target'. Best Practice & Research In Clinical Gastroenterology, 28 (4):585-597 [Details]
	(2014)	'The role of pure iterative reconstruction in conventional dose CT enterography' Murphy, K. P.,Crush, L.,McLaughlin, P. D.,O'Sullivan, H. S.,Twomey, M.,Lynch, S.,Bye, J.,McSweeney, S. E.,O'Connor, O. J.,Shanahan, F.,Maher, M. M. (2014) 'The role of pure iterative reconstruction in conventional dose CT enterography'. Abdominal Imaging, [Details]
	(2014)	'Identification of a unique hybrid macrophage-polarization state following recovery from lipopolysaccharide tolerance' O'Carroll, C.,Fagan, A.,Shanahan, F.,Carmody, R. J. (2014) 'Identification of a unique hybrid macrophage-polarization state following recovery from lipopolysaccharide tolerance'. Journal of Immunology, 192 (1):427-436 [Details]
	(2014)	'Effect of phylloquinone (vitamin K1) supplementation for 12 months on the indices of vitamin K status and bone health in adult patients with Crohn's disease' O'Connor, E. M.,Grealy, G.,McCarthy, J.,Desmond, A.,Craig, O.,Shanahan, F.,Cashman, K. D. (2014) 'Effect of phylloquinone (vitamin K1) supplementation for 12 months on the indices of vitamin K status and bone health in adult patients with Crohn's disease'. British Journal of Nutrition, 112 (7):1163-1174 [Details]
	(2014)	'Ethereal and material gain: unanticipated opportunity with illness or disability' O'Mahony, S.,Shanahan, F. (2014) 'Ethereal and material gain: unanticipated opportunity with illness or disability'. Clinical Medicine, 14 (1):44-46 [Details]
	(2014)	'The future of probiotics for disorders of the brain-gut axis' Quigley, E. M.,Shanahan, F. (2014) 'The future of probiotics for disorders of the brain-gut axis'. Adv Exp Med Bioladv Exp Med Biol, 817 :417-432 [Details]
	(2014)	'The sustained trajectory of small bowel research' Shanahan, F. (2014) 'The sustained trajectory of small bowel research'. Current Opinion In Gastroenterology, 30 (2):117-119 [Details]
	(2014)	'Host-microbe interactions and spatial variation of cancer in the gut' Shanahan, F.,O'Toole, P. W. (2014) 'Host-microbe interactions and spatial variation of cancer in the gut'. Nat Rev Cancernat Rev Cancer, 14 (8):511-512 [Details]
	(2014)	'Manipulation of the microbiota for treatment of IBS and IBD-challenges and controversies' Shanahan, F.,Quigley, E. M. (2014) 'Manipulation of the microbiota for treatment of IBS and IBD-challenges and controversies'. Gastroenterology, 146 (6):1554-1563 [Details]
	(2014)	'Gastric digestion of alpha-lactalbumin in adult human subjects using capsule endoscopy and nasogastric tube sampling' Sullivan, L. M.,Kehoe, J. J.,Barry, L.,Buckley, M. J.,Shanahan, F.,Mok, K. H.,Brodkorb, A. (2014) 'Gastric digestion of alpha-lactalbumin in adult human subjects using capsule endoscopy and nasogastric tube sampling'. British Journal of Nutrition, 112 (4):638-646 [Details]
	(2013)	'A prospective feasibility study of sub-millisievert abdominopelvic CT using iterative reconstruction in Crohn's disease' O'Neill, S. B.,Mc Laughlin, P. D.,Crush, L.,O'Connor, O. J.,Mc Williams, S. R.,Craig, O.,Mc Garrigle, A. M.,O'Neill, F.,Bye, J.,Ryan, M. F.,Shanahan, F.,Maher, M. M. (2013) 'A prospective feasibility study of sub-millisievert abdominopelvic CT using iterative reconstruction in Crohn's disease'. European Radiology, 23 (99):2503-2512   [Details]
	(2013)	'Targeting the EP1 receptor reduces Fas ligand expression and increases the antitumor immune response in an in vivo model of colon cancer' O'Callaghan, G.,Ryan, A.,Neary, P.,O'Mahony, C.,Shanahan, F.,Houston, A. (2013) 'Targeting the EP1 receptor reduces Fas ligand expression and increases the antitumor immune response in an in vivo model of colon cancer'. International Journal of Cancer, 133 (4):825-834   [Details]
	(2013)	'The microbiome-gut-brain axis during early life regulates the hippocampal serotonergic system in a sex-dependent manner' Clarke, G.,Grenham, S.,Scully, P.,Fitzgerald, P.,Moloney, R. D.,Shanahan, F.,Dinan, T. G.,Cryan, J. F. (2013) 'The microbiome-gut-brain axis during early life regulates the hippocampal serotonergic system in a sex-dependent manner'. Molecular Psychiatry, 18 (66):666-673   [Details]
	(2013)	'Gene silencing of TNF-alpha in a murine model of acute colitis using a modified cyclodextrin delivery system' McCarthy, J.,O'Neill, M. J.,Bourre, L.,Walsh, D.,Quinlan, A.,Hurley, G.,Ogier, J.,Shanahan, F.,Melgar, S.,Darcy, R.,O'Driscoll, C. M. (2013) 'Gene silencing of TNF-alpha in a murine model of acute colitis using a modified cyclodextrin delivery system'. Journal of controlled release : official journal of the Controlled Release Society, 168 (1):28-34   [Details]
	(2013)	'The colonic microbiota in health and disease' Shanahan, F. (2013) 'The colonic microbiota in health and disease'. Curr Opin Gastroenterol, 29 (11):49-5449   [Details]
	(2013)	'Targeting the microbiota to address diet-induced obesity: a time dependent challenge' Clarke, S. F.,Murphy, E. F.,O'Sullivan, O.,Ross, R. P.,O'Toole, P. W.,Shanahan, F.,Cotter, P. D. (2013) 'Targeting the microbiota to address diet-induced obesity: a time dependent challenge'. Plos One, 8 (6) [Details]
	(2013)	'Challenges and implications for biomedical research and intervention studies in older populations: insights from the ELDERMET study' Cusack, S.,O'Toole, P. W. (2013) 'Challenges and implications for biomedical research and intervention studies in older populations: insights from the ELDERMET study'. Gerontology, 59 (22):114-121 [Details]
	(2013)	'Risk factors for hand injury in hurling: a cross-sectional study' Falvey, E.,McCrory, P.,Crowley, B.,Kelleher, A.,Eustace, J.,Shanahan, F.,Molloy, M. G. (2013) 'Risk factors for hand injury in hurling: a cross-sectional study'. Bmj Open, 3 (55) [Details]
	(2013)	'Bifidobacterium infantis 35624 modulates host inflammatory processes beyond the gut' Groeger, D.,O'Mahony, L.,Murphy, E. F.,Bourke, J. F.,Dinan, T. G.,Kiely, B.,Shanahan, F.,Quigley, E. M. (2013) 'Bifidobacterium infantis 35624 modulates host inflammatory processes beyond the gut'. Gut microbes, 4 (4) [Details]
	(2013)	'Natural killer cells protect against mucosal and systemic infection with the enteric pathogen Citrobacter rodentium' Hall, L. J.,Murphy, C. T.,Hurley, G.,Quinlan, A.,Shanahan, F.,Nally, K.,Melgar, S. (2013) 'Natural killer cells protect against mucosal and systemic infection with the enteric pathogen Citrobacter rodentium'. Infect Immuninfect Immun, 81 (22):460-469 [Details]
	(2013)	'Depth-dependent differences in community structure of the human colonic microbiota in health' Lavelle, A.,Lennon, G.,Docherty, N.,Balfe, A.,Mulcahy, H. E.,Doherty, G.,O. Donoghue D,Hyland, J. M.,Shanahan, F.,Sheahan, K.,Coffey, J. C.,Winter, D. C.,O. Connell PR (2013) 'Depth-dependent differences in community structure of the human colonic microbiota in health'. Plos One, 8 (1111) [Details]
	(2013)	'Antimicrobials: Strategies for targeting obesity and metabolic health?' Murphy, E. F.,Clarke, S. F.,Marques, T. M.,Hill, C.,Stanton, C.,Ross, R. P.,O'Doherty, R. M.,Shanahan, F.,Cotter, P. D. (2013) 'Antimicrobials: Strategies for targeting obesity and metabolic health?'. Gut microbes, 4 (11):48-53 [Details]
	(2013)	'Bcl-3 deficiency protects against dextran-sodium sulphate-induced colitis in the mouse' O'Carroll, C.,Moloney, G.,Hurley, G.,Melgar, S.,Brint, E.,Nally, K.,Nibbs, R. J.,Shanahan, F.,Carmody, R. J. (2013) 'Bcl-3 deficiency protects against dextran-sodium sulphate-induced colitis in the mouse'. Clin Exp Immunolclin Exp Immunol, 173 (2):332-342 [Details]
	(2013)	'Digestion of epithelial tight junction proteins by the commensal Clostridium perfringens' Pruteanu, M.,Shanahan, F. (2013) 'Digestion of epithelial tight junction proteins by the commensal Clostridium perfringens'. American Journal of Physiology - Gastrointestinal and Liver Physiology, 305 :740-748 [Details]
	(2013)	'Phylogenetic analysis of dysbiosis in ulcerative colitis during remission' Rajilic-Stojanovic, M.,Shanahan, F.,Guarner, F.,de Vos, W. M. (2013) 'Phylogenetic analysis of dysbiosis in ulcerative colitis during remission'. Inflammatory Bowel Diseases, 19 (3):481-488 [Details]
	(2013)	'Identification of TLR10 as a key mediator of the inflammatory response to Listeria monocytogenes in intestinal epithelial cells and macrophages' Regan, T.,Nally, K.,Carmody, R.,Houston, A.,Shanahan, F.,Macsharry, J.,Brint, E. (2013) 'Identification of TLR10 as a key mediator of the inflammatory response to Listeria monocytogenes in intestinal epithelial cells and macrophages'. Journal of Immunology, 191 (1212):6084-92 [Details]
	(2013)	'The neglected spectrum of diverticular-related disorders' Shanahan, F. (2013) 'The neglected spectrum of diverticular-related disorders'. Clinical Gastroenterology and Hepatology, 11 (1212):1620-1621 [Details]
	(2013)	'In praise of the literary eponym--Henry V sign' Shanahan, F.,Houlihan, C.,Marks, J. C. (2013) 'In praise of the literary eponym--Henry V sign'. QJM (Quarterly Journal of Medicine), 106 (11):93-94 [Details]
	(2013)	'A randomized controlled study of mesalamine after acute diverticulitis: results of the DIVA trial' Stollman, N.,Magowan, S.,Shanahan, F.,Quigley, E. M. (2013) 'A randomized controlled study of mesalamine after acute diverticulitis: results of the DIVA trial'. Journal of Clinical Gastroenterology, 47 (7):621-629 [Details]
	(2012)	'Bifidobacterial surface-exopolysaccharide facilitates commensal-host interaction through immune modulation and pathogen protection' Fanning, S.,Hall, L. J.,Cronin, M.,Zomer, A.,MacSharry, J.,Goulding, D.,Motherway, M. O.,Shanahan, F.,Nally, K.,Dougan, G.,van Sinderen, D. (2012) 'Bifidobacterial surface-exopolysaccharide facilitates commensal-host interaction through immune modulation and pathogen protection'. Proc Natl Acad Sci U S Aproc Natl Acad Sci U S A, 109 (66):2108-2113   [Details]
	(2012)	'Microbes and metabolic health' Shanahan, F. (2012) 'Microbes and metabolic health'. Gut, 61 (1212):1655-16561655   [Details]
	(2012)	'The gut microbiota-a clinical perspective on lessons learned' Shanahan, F. (2012) 'The gut microbiota-a clinical perspective on lessons learned'. Nature Reviews Gastroenterology & Hepatology, 9 (1010):609-614609   [Details]
	(2012)	'Immunomodulatory effects of feeding with Bifidobacterium longum on allergen-induced lung inflammation in the mouse' MacSharry, J.,O'Mahony, C.,Shalaby, K. H.,Sheil, B.,Karmouty-Quintana, H.,Shanahan, F.,Martin, J. G. (2012) 'Immunomodulatory effects of feeding with Bifidobacterium longum on allergen-induced lung inflammation in the mouse'. Pulmonary Pharmacology & Therapeutics, 25 (44):325-334   [Details]
	(2012)	'The microbiota in inflammatory bowel disease: friend, bystander, and sometime-villain' Shanahan, F. (2012) 'The microbiota in inflammatory bowel disease: friend, bystander, and sometime-villain'. Nutr Rev, 70   [Details]
	(2012)	'Managing chronic disease in Ireland: hospital admission rates and clinical outcomes in a large ulcerative colitis population' Desmond, A. N.,Shanahan, F. (2012) 'Managing chronic disease in Ireland: hospital admission rates and clinical outcomes in a large ulcerative colitis population'. Irish Journal of Medical Science, 181 (11):65-71   [Details]
	(2012)	'Bacteriophages phiMR299-2 and phiNH-4 can eliminate Pseudomonas aeruginosa in the murine lung and on cystic fibrosis lung airway cells' Alemayehu, D.,Casey, P. G.,McAuliffe, O.,Guinane, C. M.,Martin, J. G.,Shanahan, F.,Coffey, A.,Ross, R. P.,Hill, C. (2012) 'Bacteriophages phiMR299-2 and phiNH-4 can eliminate Pseudomonas aeruginosa in the murine lung and on cystic fibrosis lung airway cells'. Mbio, 3 (22) [Details]
	(2012)	'Bifidobacterium breve with alpha-linolenic acid and linoleic acid alters fatty acid metabolism in the maternal separation model of irritable bowel syndrome' Barrett, E.,Fitzgerald, P.,Dinan, T. G.,Cryan, J. F.,Ross, R. P.,Quigley, E. M.,Shanahan, F.,Kiely, B.,Fitzgerald, G. F.,O'Toole, P. W.,Stanton, C. (2012) 'Bifidobacterium breve with alpha-linolenic acid and linoleic acid alters fatty acid metabolism in the maternal separation model of irritable bowel syndrome'. Plos One, 7 (11) [Details]
	(2012)	'The gut microbiota and its relationship to diet and obesity: new insights' Clarke, S. F.,Murphy, E. F.,Nilaweera, K.,Ross, P. R.,Shanahan, F.,O'Toole, P. W.,Cotter, P. D. (2012) 'The gut microbiota and its relationship to diet and obesity: new insights'. Gut microbes, 3 (3):186-202 [Details]
	(2012)	'Diagnostic accuracy of computed tomography using lower doses of radiation for patients with Crohn's disease' Craig, O.,O'Neill, S.,O'Neill, F.,McLaughlin, P.,McGarrigle, A.,McWilliams, S.,O'Connor, O.,Desmond, A.,Walsh, E. K.,Ryan, M.,Maher, M.,Shanahan, F. (2012) 'Diagnostic accuracy of computed tomography using lower doses of radiation for patients with Crohn's disease'. Clinical Gastroenterology and Hepatology, 10 (88):886-892 [Details]
	(2012)	'Radiation exposure from diagnostic imaging among patients with gastrointestinal disorders' Desmond, A. N.,McWilliams, S.,Maher, M. M.,Shanahan, F.,Quigley, E. M. (2012) 'Radiation exposure from diagnostic imaging among patients with gastrointestinal disorders'. Clinical Gastroenterology and Hepatology, 10 (33):259-265 [Details]
	(2012)	'Selection of symptomatic patients with Crohn's disease for abdominopelvic computed tomography: role of serum C-reactive protein' Desmond, A. N.,O'Regan, K.,Malik, N.,McWilliams, S.,O'Neill, S.,Quigley, E. M.,Shanahan, F.,Maher, M. M. (2012) 'Selection of symptomatic patients with Crohn's disease for abdominopelvic computed tomography: role of serum C-reactive protein'. Canadian Association of Radiologists Journal, 63 (44):267-274 [Details]
	(2012)	'World Gastroenterology Organisation Global Guidelines: probiotics and prebiotics October 2011' Guarner, F.,Khan, A. G.,Garisch, J.,Eliakim, R.,Gangl, A.,Thomson, A.,Krabshuis, J.,Lemair, T.,Kaufmann, P.,de Paula, J. A.,Fedorak, R.,Shanahan, F.,Sanders, M. E.,Szajewska, H.,Ramakrishna, B. S.,Karakan, T.,Kim, N. (2012) 'World Gastroenterology Organisation Global Guidelines: probiotics and prebiotics October 2011'. Journal of Clinical Gastroenterology, 46 (66):468-481 [Details]
	(2012)	'Increased risk of miscarriage and ectopic pregnancy among women with irritable bowel syndrome' Khashan, A. S.,Quigley, E. M.,McNamee, R.,McCarthy, F. P.,Shanahan, F.,Kenny, L. C. (2012) 'Increased risk of miscarriage and ectopic pregnancy among women with irritable bowel syndrome'. Clin Gastroenterol Hepatolclin Gastroenterol Hepatol, 10 (88):902-909 [Details]
	(2012)	'Portrait of an immunoregulatory Bifidobacterium' Konieczna, P.,Akdis, C. A.,Quigley, E. M.,Shanahan, F.,O'Mahony, L. (2012) 'Portrait of an immunoregulatory Bifidobacterium'. Gut microbes, 3 (33):261-266 [Details]
	(2012)	'Bifidobacterium infantis 35624 administration induces Foxp3 T regulatory cells in human peripheral blood: potential role for myeloid and plasmacytoid dendritic cells' Konieczna, P.,Groeger, D.,Ziegler, M.,Frei, R.,Ferstl, R.,Shanahan, F.,Quigley, E. M.,Kiely, B.,Akdis, C. A.,O'Mahony, L. (2012) 'Bifidobacterium infantis 35624 administration induces Foxp3 T regulatory cells in human peripheral blood: potential role for myeloid and plasmacytoid dendritic cells'. Gut, 61 (33):354-366 [Details]
	(2012)	'Minimization of Radiation Exposure due to Computed Tomography in Inflammatory Bowel Disease' Mc Laughlin, P. D.,O'Connor, O. J.,O'Neill, S. B.,Shanahan, F.,Maher, M. M. (2012) 'Minimization of Radiation Exposure due to Computed Tomography in Inflammatory Bowel Disease'. ISRN Gastroenterol, 2012 [Details]
	(2012)	'Computed tomography assessment of intestinal gas volumes in functional gastrointestinal disorders' Mc Williams, S. R.,Mc Laughlin, P. D.,O'Connor, O. J.,Desmond, A. N.,Ni Laoire, A.,Shanahan, F.,Quigley, E. M.,Maher, M. M. (2012) 'Computed tomography assessment of intestinal gas volumes in functional gastrointestinal disorders'. Journal Of Neurogastroenterology And Motility, 18 (44):419-425 [Details]
	(2012)	'CT-based estimation of intracavitary gas volumes using threshold-based segmentation: in vitro study to determine the optimal threshold range' McWilliams, S. R.,O'Connor, O. J.,McGarrigle, A. M.,O'Neill, S. B.,Quigley, E. M.,Shanahan, F.,Maher, M. M. (2012) 'CT-based estimation of intracavitary gas volumes using threshold-based segmentation: in vitro study to determine the optimal threshold range'. Journal of Medical Imaging and Radiation Oncology, 56 (33):289-294 [Details]
	(2012)	'The sphingosine-1-phosphate analogue FTY720 impairs mucosal immunity and clearance of the enteric pathogen Citrobacter rodentium' Murphy, C. T.,Hall, L. J.,Hurley, G.,Quinlan, A.,MacSharry, J.,Shanahan, F.,Nally, K.,Melgar, S. (2012) 'The sphingosine-1-phosphate analogue FTY720 impairs mucosal immunity and clearance of the enteric pathogen Citrobacter rodentium'. Infect Immuninfect Immun, 80 (88):2712-2723 [Details]
	(2012)	'Shining a light on intestinal traffic' Murphy, C. T.,Nally, K.,Shanahan, F.,Melgar, S. (2012) 'Shining a light on intestinal traffic'. Clin Dev Immunol, 2012 [Details]
	(2012)	'Radiologic imaging in cystic fibrosis: cumulative effective dose and changing trends over 2 decades' O'Connell, O. J.,McWilliams, S.,McGarrigle, A.,O'Connor, O. J.,Shanahan, F.,Mullane, D.,Eustace, J.,Maher, M. M.,Plant, B. J. (2012) 'Radiologic imaging in cystic fibrosis: cumulative effective dose and changing trends over 2 decades'. Chest, 141 (66):1575-1583 [Details]
	(2012)	'Role of radiologic imaging in irritable bowel syndrome: evidence-based review' O'Connor, O. J.,McSweeney, S. E.,McWilliams, S.,O'Neill, S.,Shanahan, F.,Quigley, E. M.,Maher, M. M. (2012) 'Role of radiologic imaging in irritable bowel syndrome: evidence-based review'. Radiology, 262 (22):485-94 [Details]
	(2012)	'Clostridium difficile carriage in elderly subjects and associated changes in the intestinal microbiota' Rea, M. C.,O'Sullivan, O.,Shanahan, F.,O'Toole, P. W.,Stanton, C.,Ross, R. P.,Hill, C. (2012) 'Clostridium difficile carriage in elderly subjects and associated changes in the intestinal microbiota'. Journal of Clinical Microbiology, 50 (33):867-875 [Details]
	(2012)	'A commentary on the safety of probiotics' Shanahan, F. (2012) 'A commentary on the safety of probiotics'. Gastroenterol Clin North Am, 41 (44):869-76 [Details]
	(2012)	'The colonic microbiota and colonic disease' Shanahan, F. (2012) 'The colonic microbiota and colonic disease'. Curr Gastroenterol Rep, 14 (55):446-52 [Details]
	(2012)	'Darwinian dyspepsia: an extraordinary scientist, an ordinary illness, great dignity' Shanahan, F. (2012) 'Darwinian dyspepsia: an extraordinary scientist, an ordinary illness, great dignity'. American Journal of Gastroenterology, 107 (2):161-164 [Details]
	(2012)	'The gut microbiota in 2011: Translating the microbiota to medicine' Shanahan, F. (2012) 'The gut microbiota in 2011: Translating the microbiota to medicine'. Nat Rev Gastroenterol Hepatolnat Rev Gastroenterol Hepatol, 9 (2):72-74 [Details]
	(2012)	'In search of lost opportunities: Marcel Proyce and James Joust discuss doctors, diseases, life and death (a hypothetical conversation between Marcel Proust and James Joyce)' Shanahan, F.,Quigley, E. M. (2012) 'In search of lost opportunities: Marcel Proyce and James Joust discuss doctors, diseases, life and death (a hypothetical conversation between Marcel Proust and James Joyce)'. Perspect Biol Med, 55 (11):155-61 [Details]
	(2012)	'Bifidobacterium infantis 35624 protects against salmonella-induced reductions in digestive enzyme activity in mice by attenuation of the host inflammatory response' Symonds, E. L.,O'Mahony, C.,Lapthorne, S.,O'Mahony, D.,Sharry, J. M.,O'Mahony, L.,Shanahan, F. (2012) 'Bifidobacterium infantis 35624 protects against salmonella-induced reductions in digestive enzyme activity in mice by attenuation of the host inflammatory response'. Clin Transl Gastroenterolclin Transl Gastroenterol, 3 [Details]
	(2012)	'Mechanism of protection of transepithelial barrier function by Lactobacillus salivarius: strain dependence and attenuation by bacteriocin production' Miyauchi, E.,O'Callaghan, J.,Butto, L. F.,Hurley, G.,Melgar, S.,Tanabe, S.,Shanahan, F.,Nally, K.,O'Toole, P. W. (2012) 'Mechanism of protection of transepithelial barrier function by Lactobacillus salivarius: strain dependence and attenuation by bacteriocin production'. American Journal Of Physiology-Gastrointestinal And Liver Physiology, 303 (99)   [Details]
	(2011)	'Who needs doctors? Staying fresh in changing times' Shanahan, F. (2011) 'Who needs doctors? Staying fresh in changing times'. Clin Med, 11 (66):587-588587   [Details]
	(2011)	'Increased health burden associated with Clostridium difficile diarrhoea in inflammatory bowel disease' Rampton, D. S.,Shanahan, F. (2011) 'Increased health burden associated with Clostridium difficile diarrhoea in inflammatory bowel disease'. Aliment Pharmacol Ther, 34 (33):394-395394   [Details]
	(2011)	'The hybrid science of diet, microbes, and metabolic health' Shanahan, F.,Murphy, E. (2011) 'The hybrid science of diet, microbes, and metabolic health'. American Journal of Clinical Nutrition, 94 (11):1-2   [Details]
	(2011)	'Biochemical and metabolomic phenotyping in the identification of a vitamin D responsive metabotype for markers of the metabolic syndrome' O'Sullivan, A.,Gibney, M. J.,Connor, A. O.,Mion, B.,Kaluskar, S.,Cashman, K. D.,Flynn, A.,Shanahan, F.,Brennan, L. (2011) 'Biochemical and metabolomic phenotyping in the identification of a vitamin D responsive metabotype for markers of the metabolic syndrome'. Molecular Nutrition & Food Research, 55 (55):679-690   [Details]
	(2011)	'Composition, variability, and temporal stability of the intestinal microbiota of the elderly' Claesson, M. J.,Cusack, S.,O'Sullivan, O.,Greene-Diniz, R.,de Weerd, H.,Flannery, E.,Marchesi, J. R.,Falush, D.,Dinan, T.,Fitzgerald, G.,Stanton, C.,van Sinderen, D.,O'Connor, M.,Harnedy, N.,O'Connor, K.,Henry, C.,O'Mahony, D.,Fitzgerald, A. P.,Shanahan, F.,Twomey, C.,Hill, C.,Ross, R. P.,O'Toole, P. W. (2011) 'Composition, variability, and temporal stability of the intestinal microbiota of the elderly'. Proc Natl Acad Sci U S A, 108 :4586-45914586   [Details]
	(2011)	'Effect of broad- and narrow-spectrum antimicrobials on Clostridium difficile and microbial diversity in a model of the distal colon' Rea, M. C.,Dobson, A.,O'Sullivan, O.,Crispie, F.,Fouhy, F.,Cotter, P. D.,Shanahan, F.,Kiely, B.,Hill, C.,Ross, R. P. (2011) 'Effect of broad- and narrow-spectrum antimicrobials on Clostridium difficile and microbial diversity in a model of the distal colon'. Proc Natl Acad Sci U S Aproc Natl Acad Sci U S A, 108 :4639-4644   [Details]
	(2011)	'Minimization of radiation exposure due to computed tomography in inflammatory bowel disease' O'Neill, S. B.,O'Connor, O. J.,McWilliams, S. R.,Shanahan, F.,Maher, M. M. (2011) 'Minimization of radiation exposure due to computed tomography in inflammatory bowel disease'. Clin Res Hepatol Gastroenterol, 35 (22):105-110105   [Details]
	(2011)	'An unusual phenotype in Muckle-Wells syndrome associated with NLRP3 E311K' Murphy, G.,Daly, M.,O'Sullivan, M.,Stack, J.,Rowczenio, D.,Lachmann, H.,Shanahan, F.,Harney, S.,Hawkins, P.,Molloy, M. (2011) 'An unusual phenotype in Muckle-Wells syndrome associated with NLRP3 E311K'. Rheumatology, 50 (22):419-420   [Details]
	(2011)	'The colonic microflora and probiotic therapy in health and disease' Shanahan, F. (2011) 'The colonic microflora and probiotic therapy in health and disease'. Curr Opin Gastroenterol, 27 (11):61-6561   [Details]
	(2011)	'Differential expression of toll-like receptors in patients with irritable bowel syndrome' Brint, E. K.,MacSharry, J.,Fanning, A.,Shanahan, F.,Quigley, E. M. (2011) 'Differential expression of toll-like receptors in patients with irritable bowel syndrome'. American Journal of Gastroenterology, 106 (22):329-336 [Details]
	(2011)	'Perplexing plain abdominal x-ray. Radiographic opacities were due to the lanthanum' Crush, L.,O'Connor, O. J.,Plant, W.,Clarkson, M. R.,Shanahan, F.,Maher, M. M. (2011) 'Perplexing plain abdominal x-ray. Radiographic opacities were due to the lanthanum'. Gut, 60 (22) [Details]
	(2011)	'Targeting the replication checkpoint using SCH 900776, a potent and functionally selective CHK1 inhibitor identified via high content screening' Guzi, T. J.,Paruch, K.,Dwyer, M. P.,Labroli, M.,Shanahan, F.,Davis, N.,Taricani, L.,Wiswell, D.,Seghezzi, W.,Penaflor, E.,Bhagwat, B.,Wang, W.,Gu, D.,Hsieh, Y.,Lee, S.,Liu, M.,Parry, D. (2011) 'Targeting the replication checkpoint using SCH 900776, a potent and functionally selective CHK1 inhibitor identified via high content screening'. Mol Cancer Ther, 10 (44):591-602 [Details]
	(2011)	'Induction and activation of adaptive immune populations during acute and chronic phases of a murine model of experimental colitis' Hall, L. J.,Faivre, E.,Quinlan, A.,Shanahan, F.,Nally, K.,Melgar, S. (2011) 'Induction and activation of adaptive immune populations during acute and chronic phases of a murine model of experimental colitis'. Digestive Diseases and Sciences, 56 (11):79-89 [Details]
	(2011)	'Degradation of the extracellular matrix components by bacterial-derived metalloproteases: implications for inflammatory bowel diseases' Pruteanu, M.,Hyland, N. P.,Clarke, D. J.,Kiely, B.,Shanahan, F. (2011) 'Degradation of the extracellular matrix components by bacterial-derived metalloproteases: implications for inflammatory bowel diseases'. Inflammatory Bowel Diseases, 17 (55):1189-1200 [Details]
	(2011)	'Recombinant lactobacilli expressing linoleic acid isomerase can modulate the fatty acid composition of host adipose tissue in mice' Rosberg-Cody, E.,Stanton, C.,O'Mahony, L.,Wall, R.,Shanahan, F.,Quigley, E. M.,Fitzgerald, G. F.,Ross, R. P. (2011) 'Recombinant lactobacilli expressing linoleic acid isomerase can modulate the fatty acid composition of host adipose tissue in mice'. Microbiologymicrobiology, 157 (Pt 2):609-615 [Details]
	(2011)	'Small intestinal bacterial overgrowth in nonalcoholic steatohepatitis: association with toll-like receptor 4 expression and plasma levels of interleukin 8' Shanab, A. A.,Scully, P.,Crosbie, O.,Buckley, M.,O'Mahony, L.,Shanahan, F.,Gazareen, S.,Murphy, E.,Quigley, E. M. (2011) 'Small intestinal bacterial overgrowth in nonalcoholic steatohepatitis: association with toll-like receptor 4 expression and plasma levels of interleukin 8'. Digestive Diseases and Sciences, 56 (55):1524-1534 [Details]
	(2011)	'Enterococcus faecalis metalloprotease compromises epithelial barrier and contributes to intestinal inflammation' Steck, N.,Hoffmann, M.,Sava, I. G.,Kim, S. C.,Hahne, H.,Tonkonogy, S. L.,Mair, K.,Krueger, D.,Pruteanu, M.,Shanahan, F.,Vogelmann, R.,Schemann, M.,Kuster, B.,Sartor, R. B.,Haller, D. (2011) 'Enterococcus faecalis metalloprotease compromises epithelial barrier and contributes to intestinal inflammation'. Gastroenterology, 141 (33):959-971 [Details]
	(2010)	'Mycobacterium avium subsp. Paratuberculosis (MAP) as a modifying factor in Crohn's disease' Sibartie, S.,Scully, P.,Keohane, J.,O'Neill, S.,O'Mahony, J.,O'Hanlon, D.,Kirwan, W. O.,O'Mahony, L.,Shanahan, F. (2010) 'Mycobacterium avium subsp. Paratuberculosis (MAP) as a modifying factor in Crohn's disease'. Inflammatory Bowel Diseases, 16 (2):296-304 [Details]
	(2010)	'Exercise-induced bronchoconstriction and exercise testing in an international rugby union team' Falvey, E. C.,McCarthy, C.,O'Connor, T. M.,Shanahan, F.,Molloy, M. G.,Plant, B. J. (2010) 'Exercise-induced bronchoconstriction and exercise testing in an international rugby union team'. Thorax, 65 (99):843-844843   [Details]
	(2010)	'Esophageal intramural pseudodiverticulosis characterized by barium esophagography: a case report' O'Connor, O. J.,Brady, A.,Shanahan, F.,Quigley, E.,O'Riordain, M.,Maher, M. M. (2010) 'Esophageal intramural pseudodiverticulosis characterized by barium esophagography: a case report'. Journal of Medical Case Reports, 4 [Details]
	(2010)	'Dinaciclib (SCH 727965), a novel and potent cyclin-dependent kinase inhibitor' Parry, D.,Guzi, T.,Shanahan, F.,Davis, N.,Prabhavalkar, D.,Wiswell, D.,Seghezzi, W.,Paruch, K.,Dwyer, M. P.,Doll, R.,Nomeir, A.,Windsor, W.,Fischmann, T.,Wang, Y.,Oft, M.,Chen, T.,Kirschmeier, P.,Lees, E. M. (2010) 'Dinaciclib (SCH 727965), a novel and potent cyclin-dependent kinase inhibitor'. Mol Cancer Ther, 9 (88):2344-53 [Details]
	(2010)	'Discovery of Dinaciclib (SCH 727965): A Potent and Selective Inhibitor of Cyclin-Dependent Kinases' Paruch, K.,Dwyer, M. P.,Alvarez, C.,Brown, C.,Chan, T. Y.,Doll, R. J.,Keertikar, K.,Knutson, C.,McKittrick, B.,Rivera, J.,Rossman, R.,Tucker, G.,Fischmann, T.,Hruza, A.,Madison, V.,Nomeir, A. A.,Wang, Y.,Kirschmeier, P.,Lees, E.,Parry, D.,Sgambellone, N.,Seghezzi, W.,Schultz, L.,Shanahan, F.,Wiswell, D.,Xu, X.,Zhou, Q.,James, R. A.,Paradkar, V. M.,Park, H.,Rokosz, L. R.,Stauffer, T. M.,Guzi, T. J. (2010) 'Discovery of Dinaciclib (SCH 727965): A Potent and Selective Inhibitor of Cyclin-Dependent Kinases'. Acs Med Chem Lettacs Med Chem Lett, 1 (5):204-208 [Details]
	(2010)	'Asymptomatic carriage of Clostridium difficile in an Irish continuing care institution for the elderly: prevalence and characteristics' Ryan, J.,Murphy, C.,Twomey, C.,Paul Ross, R.,Rea, M. C.,MacSharry, J.,Sheil, B.,Shanahan, F. (2010) 'Asymptomatic carriage of Clostridium difficile in an Irish continuing care institution for the elderly: prevalence and characteristics'. Irish Journal of Medical Science, 179 (2):245-250 [Details]
	(2010)	'Plasma cytokine profiles in females with irritable bowel syndrome and extra-intestinal co-morbidity' Scully, P.,McKernan, D. P.,Keohane, J.,Groeger, D.,Shanahan, F.,Dinan, T. G.,Quigley, E. M. (2010) 'Plasma cytokine profiles in females with irritable bowel syndrome and extra-intestinal co-morbidity'. American Journal of Gastroenterology, 105 (1010):2235-2243 [Details]
	(2010)	'Probiotics in perspective' Shanahan, F. (2010) 'Probiotics in perspective'. Gastroenterology, 139 (66):1808-12 [Details]
	(2010)	'99th Dahlem conference on infection, inflammation and chronic inflammatory disorders: host-microbe interactions in the gut: target for drug therapy, opportunity for drug discovery' Shanahan, F. (2010) '99th Dahlem conference on infection, inflammation and chronic inflammatory disorders: host-microbe interactions in the gut: target for drug therapy, opportunity for drug discovery'. Clin Exp Immunol, 160 (11):92-7 [Details]
	(2010)	'Gut microbes: from bugs to drugs' Shanahan, F. (2010) 'Gut microbes: from bugs to drugs'. Am J Gastroenterol, 105 (22):275-9 [Details]
	(2010)	'Pharmabiotic manipulation of the microbiota in gastrointestinal disorders, from rationale to reality' Shanahan, F.,Collins, S. M. (2010) 'Pharmabiotic manipulation of the microbiota in gastrointestinal disorders, from rationale to reality'. Gastroenterol Clin North Am, 39 (33):721-6 [Details]
	(2010)	'Probiotic colonization of the adherent mucus layer of HT29MTXE12 cells attenuates Campylobacter jejuni virulence properties' Alemka, A.,Clyne, M.,Shanahan, F.,Tompkins, T.,Corcionivoschi, N.,Bourke, B. (2010) 'Probiotic colonization of the adherent mucus layer of HT29MTXE12 cells attenuates Campylobacter jejuni virulence properties'. Infect Immuninfect Immun, 78 (66):2812-2822 [Details]
	(2010)	'A molecular analysis of fecal and mucosal bacterial communities in irritable bowel syndrome' Codling, C.,O'Mahony, L.,Shanahan, F.,Quigley, E. M.,Marchesi, J. R. (2010) 'A molecular analysis of fecal and mucosal bacterial communities in irritable bowel syndrome'. Digestive Diseases and Sciences, 55 (22):392-397 [Details]
	(2010)	'IBS: An epigenetic perspective' Dinan, T. G.,Cryan, J.,Shanahan, F.,Keeling, P. W.,Quigley, E. M. (2010) 'IBS: An epigenetic perspective'. Nat Rev Gastroenterol Hepatol, 7 (88):465-71 [Details]
	(2010)	'Bacterial strain-specific induction of Foxp3+ T regulatory cells is protective in murine allergy models' Lyons, A.,O'Mahony, D.,O'Brien, F.,MacSharry, J.,Sheil, B.,Ceddia, M.,Russell, W. M.,Forsythe, P.,Bienenstock, J.,Kiely, B.,Shanahan, F.,O'Mahony, L. (2010) 'Bacterial strain-specific induction of Foxp3+ T regulatory cells is protective in murine allergy models'. Clin Exp Allergyclin Exp Allergy, 40 (5):811-819 [Details]
	(2010)	'Inflammatory bowel disease-from mechanisms to treatment strategies' Melgar, S.,Shanahan, F. (2010) 'Inflammatory bowel disease-from mechanisms to treatment strategies'. Autoimmunity, 43 (77):463-77 [Details]
	(2010)	'Technical Advance: Function and efficacy of an {alpha}4-integrin antagonist using bioluminescence imaging to detect leukocyte trafficking in murine experimental colitis' Murphy, C. T.,Moloney, G.,Macsharry, J.,Haynes, A.,Faivre, E.,Quinlan, A.,McLean, P. G.,Lee, K.,O'Mahony, L.,Shanahan, F.,Melgar, S.,Nally, K. (2010) 'Technical Advance: Function and efficacy of an {alpha}4-integrin antagonist using bioluminescence imaging to detect leukocyte trafficking in murine experimental colitis'. Journal of Leukocyte Biology, 88 (66):1271-1278 [Details]
	(2010)	'Down-regulation of p38 mitogen-activated protein kinase activation and proinflammatory cytokine production by mitogen-activated protein kinase inhibitors in inflammatory bowel disease' Docena, G.,Rovedatti, L.,Kruidenier, L.,Fanning, A.,Leakey, N. A.,Knowles, C. H.,Lee, K.,Shanahan, F.,Nally, K.,McLean, P. G.,Di Sabatino, A.,MacDonald, T. T. (2010) 'Down-regulation of p38 mitogen-activated protein kinase activation and proinflammatory cytokine production by mitogen-activated protein kinase inhibitors in inflammatory bowel disease'. Clin Exp Immunolclin Exp Immunol, 162 (11):108-115   [Details]
	(2010)	'Phenotypic enhancement of thymidylate synthetase pathway inhibitors following ablation of Neil1 DNA glycosylase/lyase' Taricani, L.,Shanahan, F.,Pierce, R. H.,Guzi, T. J.,Parry, D. (2010) 'Phenotypic enhancement of thymidylate synthetase pathway inhibitors following ablation of Neil1 DNA glycosylase/lyase'. Cell Cycle, 9 (2424):4876-48834876   [Details]
	(2010)	'Composition and energy harvesting capacity of the gut microbiota: relationship to diet, obesity and time in mouse models' Murphy, E. F.,Cotter, P. D.,Healy, S.,Marques, T. M.,O'Sullivan, O.,Fouhy, F.,Clarke, S. F.,O'Toole, P. W.,Quigley, E. M.,Stanton, C.,Ross, P. R.,O'Doherty, R. M.,Shanahan, F. (2010) 'Composition and energy harvesting capacity of the gut microbiota: relationship to diet, obesity and time in mouse models'. Gut, 59 (1212):1635-1642   [Details]
	(2010)	'Use of bioluminescence imaging to track neutrophil migration and its inhibition in experimental colitis' Murphy, C. T.,Moloney, G.,Hall, L. J.,Quinlan, A.,Faivre, E.,Casey, P.,Shanahan, F.,Melgar, S.,Nally, K. (2010) 'Use of bioluminescence imaging to track neutrophil migration and its inhibition in experimental colitis'. Clin Exp Immunolclin Exp Immunol, 162 (11):188-196   [Details]
	(2010)	'Impact of administered bifidobacterium on murine host fatty acid composition' Wall, R.,Ross, R. P.,Shanahan, F.,O'Mahony, L.,Kiely, B.,Quigley, E.,Dinan, T. G.,Fitzgerald, G.,Stanton, C. (2010) 'Impact of administered bifidobacterium on murine host fatty acid composition'. Lipids, 45 (55):429-436 [Details]
	(2009)	'The vexed relationship between Clostridium difficile and inflammatory bowel disease: an assessment of carriage in an outpatient setting among patients in remission' Clayton, E. M.,Rea, M. C.,Shanahan, F.,Quigley, E. M.,Kiely, B.,Hill, C.,Ross, R. P. (2009) 'The vexed relationship between Clostridium difficile and inflammatory bowel disease: an assessment of carriage in an outpatient setting among patients in remission'. American Journal of Gastroenterology, 104 (5):1162-1169 [Details]
	(2009)	'Therapeutic implications of manipulating and mining the microbiota' Shanahan, F. (2009) 'Therapeutic implications of manipulating and mining the microbiota'. Journal of Physiology, 587 (Pt 17):4175-4179 [Details]
	(2009)	'Coeliac disease. Don't forget increased risk of fetal growth restriction' McCarthy, F. P.,Khashan, A. S.,Quigley, E.,Shanahan, F.,Kenny, L. (2009) 'Coeliac disease. Don't forget increased risk of fetal growth restriction'. Bmj, 338 [Details]
	(2009)	'Undiagnosed maternal celiac disease in pregnancy and an increased risk of fetal growth restriction' McCarthy, F. P.,Khashan, A. S.,Quigley, E.,Shanahan, F.,O'Regan, P.,Cronin, C.,Kenny, L. (2009) 'Undiagnosed maternal celiac disease in pregnancy and an increased risk of fetal growth restriction'. Journal of Clinical Gastroenterology, 43 (8):792-793 [Details]
	(2009)	'Metabolic activity of probiotics-oxalate degradation' Murphy, C.,Murphy, S.,O'Brien, F.,O'Donoghue, M.,Boileau, T.,Sunvold, G.,Reinhart, G.,Kiely, B.,Shanahan, F.,O'Mahony, L. (2009) 'Metabolic activity of probiotics-oxalate degradation'. Veterinary Microbiology, 136 (1-2):100-107 [Details]
	(2009)	'Modulation of pathogen-induced CCL20 secretion from HT-29 human intestinal epithelial cells by commensal bacteria' Sibartie, S.,O'Hara, A. M.,Ryan, J.,Fanning, A.,O'Mahony, J.,O'Neill, S.,Sheil, B.,O'Mahony, L.,Shanahan, F. (2009) 'Modulation of pathogen-induced CCL20 secretion from HT-29 human intestinal epithelial cells by commensal bacteria'. Bmc Immunology, 10   [Details]
	(2009)	'Loss of vagal anti-inflammatory effect: in vivo visualization and adoptive transfer' O'Mahony, C.,van der Kleij, H.,Bienenstock, J.,Shanahan, F.,O'Mahony, L. (2009) 'Loss of vagal anti-inflammatory effect: in vivo visualization and adoptive transfer'. American Journal Of Physiology-Regulatory Integrative And Comparative Physiology, 297 (4)   [Details]
	(2009)	'Bacterial signalling overrides cytokine signalling and modifies dendritic cell differentiation' Davies, J. M.,Sheil, B.,Shanahan, F. (2009) 'Bacterial signalling overrides cytokine signalling and modifies dendritic cell differentiation'. Immunology, 128 (11)   [Details]
	(2009)	'Cogan's syndrome: present and future directions' Murphy, G.,Sullivan, M. O.,Shanahan, F.,Harney, S.,Molloy, M. (2009) 'Cogan's syndrome: present and future directions'. Rheumatol Int, 29 (1010):1117-11211117   [Details]
	(2009)	'Sport and recreation-related injuries and fracture occurrence among emergency department attendees: implications for exercise prescription and injury prevention' Falvey, E. C.,Eustace, J.,Whelan, B.,Molloy, M. S.,Cusack, S. P.,Shanahan, F.,Molloy, M. G. (2009) 'Sport and recreation-related injuries and fracture occurrence among emergency department attendees: implications for exercise prescription and injury prevention'. 26 (88):590-595590   [Details]
	(2009)	'Involvement of T helper type 17 and regulatory T cell activity in Citrobacter rodentium invasion and inflammatory damage' Symonds, E. L.,Riedel, C. U.,O'Mahony, D.,Lapthorne, S.,O'Mahony, L.,Shanahan, F. (2009) 'Involvement of T helper type 17 and regulatory T cell activity in Citrobacter rodentium invasion and inflammatory damage'. Clinical and Experimental Immunology, 157 (1):148-154   [Details]
	(2009)	'The evolving epidemiology of inflammatory bowel disease' Shanahan, F.,Bernstein, C. N. (2009) 'The evolving epidemiology of inflammatory bowel disease'. Curr Opin Gastroenterol, 25 (44):301-305301   [Details]
	(2009)	'Microbiomic analysis of the bifidobacterial population in the human distal gut' Turroni, F.,Marchesi, J. R.,Foroni, E.,Gueimonde, M.,Shanahan, F.,Margolles, A.,van Sinderen, D.,Ventura, M. (2009) 'Microbiomic analysis of the bifidobacterial population in the human distal gut'. ISME Journal, 3 (6):745-751   [Details]
	(2009)	'Replication stress activates DNA polymerase alpha-associated Chk1' Taricani, L.,Shanahan, F.,Parry, D. (2009) 'Replication stress activates DNA polymerase alpha-associated Chk1'. Cell Cycle, 8 (33):482-489482   [Details]
	(2009)	'Exploring the diversity of the bifidobacterial population in the human intestinal tract' Turroni, F.,Foroni, E.,Pizzetti, P.,Giubellini, V.,Ribbera, A.,Merusi, P.,Cagnasso, P.,Bizzarri, B.,de'Angelis, G. L.,Shanahan, F.,van Sinderen, D.,Ventura, M. (2009) 'Exploring the diversity of the bifidobacterial population in the human intestinal tract'. Applied Environmental Microbiology, 75 (6):1534-1545 [Details]
	(2009)	'Portrait of a canine probiotic Bifidobacterium--from gut to gut' O'Mahony, D.,Murphy, K. B.,MacSharry, J.,Boileau, T.,Sunvold, G.,Reinhart, G.,Kiely, B.,Shanahan, F.,O'Mahony, L. (2009) 'Portrait of a canine probiotic Bifidobacterium--from gut to gut'. Veterinary Microbiology, 139 (1-2):106-112 [Details]
	(2008)	'James Joyce and gastroenterology' Shanahan, F.,Quigley, E. M. (2008) 'James Joyce and gastroenterology'. Clin Med, 8 (66):632-3 [Details]
	(2008)	'Enhanced cholinergic-mediated increase in the pro-inflammatory cytokine IL-6 in irritable bowel syndrome: role of muscarinic receptors' Dinan, T. G.,Clarke, G.,Quigley, E. M.,Scott, L. V.,Shanahan, F.,Cryan, J.,Cooney, J.,Keeling, P. W. (2008) 'Enhanced cholinergic-mediated increase in the pro-inflammatory cytokine IL-6 in irritable bowel syndrome: role of muscarinic receptors'. American Journal of Gastroenterology, 103 (10):2570-2576 [Details]
	(2008)	'Tryptophan catabolism in females with irritable bowel syndrome: relationship to interferon-gamma, severity of symptoms and psychiatric co-morbidity' Fitzgerald, P.,Cassidy Eugene, M.,Clarke, G.,Scully, P.,Barry, S.,Quigley Eamonn, M. M.,Shanahan, F.,Cryan, J.,Dinan Timothy, G. (2008) 'Tryptophan catabolism in females with irritable bowel syndrome: relationship to interferon-gamma, severity of symptoms and psychiatric co-morbidity'. Neurogastroenterol & Motility, 20 (12):1291-1297 [Details]
	(2008)	'Are patients with IBD knowledgeable about the risks of their medications?' Keohane, J.,Shanahan, F. (2008) 'Are patients with IBD knowledgeable about the risks of their medications?'. Inflamm Bowel Dis, 14 Suppl 2 [Details]
	(2008)	'High levels of Lymphotoxin-Beta (LT-Beta) gene expression in rheumatoid arthritis synovium: clinical and cytokine correlations' O'Rourke, K. P.,O'Donoghue, G.,Adams, C.,Mulcahy, H.,Molloy, C.,Silke, C.,Molloy, M.,Shanahan, F.,O'Gara, F. (2008) 'High levels of Lymphotoxin-Beta (LT-Beta) gene expression in rheumatoid arthritis synovium: clinical and cytokine correlations'. Rheumatology International, 28 (10):979-986   [Details]
	(2008)	'Human methanogen diversity and incidence in healthy and diseased colonic groups using mcrA gene analysis' Scanlan, P. D.,Shanahan, F.,Marchesi, J. R. (2008) 'Human methanogen diversity and incidence in healthy and diseased colonic groups using mcrA gene analysis'. BMC Microbiology, 8   [Details]
	(2008)	'Drug interactions in inflammatory bowel disease' Irving, P. M.,Shanahan, F.,Rampton, D. S. (2008) 'Drug interactions in inflammatory bowel disease'. 103 (11):207-219207   [Details]
	(2008)	'Bad language in gastroenterology' Shanahan, F.,Quigley, E. M. (2008) 'Bad language in gastroenterology'. Curr Gastroenterol Rep, 10 (22):91-3 [Details]
	(2008)	'Protective effects of Lactobacillus rhamnosus [corrected] and Bifidobacterium infantis in murine models for colitis do not involve the vagus nerve' van der Kleij, H.,O'Mahony, C.,Shanahan, F.,O'Mahony, L.,Bienenstock, J. (2008) 'Protective effects of Lactobacillus rhamnosus [corrected] and Bifidobacterium infantis in murine models for colitis do not involve the vagus nerve'. American Journal Of Physiology-Regulatory Integrative And Comparative Physiology, 295 (4) [Details]
	(2008)	'Prostaglandin E2 stimulates Fas ligand expression via the EP1 receptor in colon cancer cells' O'Callaghan, G.,Kelly, J.,Shanahan, F.,Houston, A. (2008) 'Prostaglandin E2 stimulates Fas ligand expression via the EP1 receptor in colon cancer cells'. British Journal of Cancer, 99 (3):502-512 [Details]
	(2008)	'Evidence of an enhanced central 5HT response in irritable bowel syndrome and in the rat maternal separation model' O'Mahony, S.,Chua, A. S.,Quigley, E. M.,Clarke, G.,Shanahan, F.,Keeling, P. W.,Dinan, T. G. (2008) 'Evidence of an enhanced central 5HT response in irritable bowel syndrome and in the rat maternal separation model'. Neurogastroenterol & Motility, 20 (6):680-688 [Details]
	(2008)	'From bugs to drugs--mining the gut microbiota' Shanahan, F. (2008) 'From bugs to drugs--mining the gut microbiota'. Curr Gastroenterol Rep, 10 (66):515-6 [Details]
	(2007)	'Colitis-associated cancer and dysplasia surveillance: an opposing perspective' Shanahan, F. (2007) 'Colitis-associated cancer and dysplasia surveillance: an opposing perspective'. Curr Gastroenterol Rep, 9 (33):175-6 [Details]
	(2007)	'Steroid allergy in patients with inflammatory bowel disease' Malik, M.,Tobin, A. M.,Shanahan, F.,O'Morain, C.,Kirby, B.,Bourke, J. (2007) 'Steroid allergy in patients with inflammatory bowel disease'. British Journal of Dermatology, 157 (5):967-969   [Details]
	(2007)	'The normal intestinal microbiota' Marchesi, J.,Shanahan, F. (2007) 'The normal intestinal microbiota'. Curr Opin Infect Dis, 20 (55):508-513508   [Details]
	(2007)	'Salmonella typhimurium stimulation combined with tumour-derived heat shock proteins induces potent dendritic cell anti-tumour responses in a murine model' Shilling, D. A.,Smith, M. J.,Tyther, R.,Sheehan, D.,England, K.,Kavanagh, E. G.,Redmond, H. P.,Shanahan, F.,O'Mahony, L. (2007) 'Salmonella typhimurium stimulation combined with tumour-derived heat shock proteins induces potent dendritic cell anti-tumour responses in a murine model'. Clinical and Experimental Immunology, 149 (1):109-116   [Details]
	(2007)	'Intestinal tuberculosis mimicking Crohn's disease: lessons relearned in a new era' Sibartie, V.,Kirwan, W. O.,O'Mahony, S.,Stack, W.,Shanahan, F. (2007) 'Intestinal tuberculosis mimicking Crohn's disease: lessons relearned in a new era'. Eur J Gastroenterol Hepatol, 19 (44):347-349347   [Details]
	(2007)	'Probiotic effects on inflammatory bowel disease' Sheil, B.,Shanahan, F.,O'Mahony, L. (2007) 'Probiotic effects on inflammatory bowel disease'. 137 (33)   [Details]
	(2007)	'Mechanisms of action of probiotics in intestinal diseases' O'Hara, A. M.,Shanahan, F. (2007) 'Mechanisms of action of probiotics in intestinal diseases'. ScientificWorldJournal, 7 :31-4631   [Details]
	(2007)	'In vitro replication models for the hepatitis C virus' Sheehy, P.,Mullan, B.,Moreau, I.,Kenny-Walsh, E.,Shanahan, F.,Scallan, M.,Fanning, L. J. (2007) 'In vitro replication models for the hepatitis C virus'. J Viral Hepat, 14 (11):2-102   [Details]
	(2007)	'Gut microbiota: mining for therapeutic potential' O'Hara, A. M.,Shanahan, F. (2007) 'Gut microbiota: mining for therapeutic potential'. Clin Gastroenterol Hepatol, 5 (33):274-84 [Details]
	(2007)	'Pyrazolo[1,5-a]pyrimidines as orally available inhibitors of cyclin-dependent kinase 2' Paruch, K.,Dwyer, M. P.,Alvarez, C.,Brown, C.,Chan, T. Y.,Doll, R. J.,Keertikar, K.,Knutson, C.,McKittrick, B.,Rivera, J.,Rossman, R.,Tucker, G.,Fischmann, T. O.,Hruza, A.,Madison, V.,Nomeir, A. A.,Wang, Y.,Lees, E.,Parry, D.,Sgambellone, N.,Seghezzi, W.,Schultz, L.,Shanahan, F.,Wiswell, D.,Xu, X.,Zhou, Q.,James, R. A.,Paradkar, V. M.,Park, H.,Rokosz, L. R.,Stauffer, T. M.,Guzi, T. J. (2007) 'Pyrazolo[1,5-a]pyrimidines as orally available inhibitors of cyclin-dependent kinase 2'. Bioorg Med Chem Lett, 17 (2222):6220-3 [Details]
	(2007)	'Chronic gastroenterologic and hepatic disorders' Shanahan, F. (2007) 'Chronic gastroenterologic and hepatic disorders'. Best Pract Res Clin Gastroenterol, 21 (55):753-4 [Details]
	(2007)	'Irritable bowel syndrome: shifting the focus toward the gut microbiota' Shanahan, F. (2007) 'Irritable bowel syndrome: shifting the focus toward the gut microbiota'. Gastroenterology, 133 (11):340-2 [Details]
	(2007)	'Versatile templates for the development of novel kinase inhibitors: Discovery of novel CDK inhibitors' Dwyer, M. P.,Paruch, K.,Alvarez, C.,Doll, R. J.,Keertikar, K.,Duca, J.,Fischmann, T. O.,Hruza, A.,Madison, V.,Lees, E.,Parry, D.,Seghezzi, W.,Sgambellone, N.,Shanahan, F.,Wiswell, D.,Guzi, T. J. (2007) 'Versatile templates for the development of novel kinase inhibitors: Discovery of novel CDK inhibitors'. Bioorg Med Chem Lett, 17 (2222):6216-62196216   [Details]
	(2006)	'Hypothalamic-pituitary-gut axis dysregulation in irritable bowel syndrome: plasma cytokines as a potential biomarker?' Dinan, T. G.,Quigley, E. M.,Ahmed, S. M.,Scully, P.,O'Brien, S.,O'Mahony, L.,O'Mahony, S.,Shanahan, F.,Keeling, P. W. (2006) 'Hypothalamic-pituitary-gut axis dysregulation in irritable bowel syndrome: plasma cytokines as a potential biomarker?'. Gastroenterology, 130 (2):304-311 [Details]
	(2006)	'Culture-independent analyses of temporal variation of the dominant fecal microbiota and targeted bacterial subgroups in Crohn's disease' Scanlan, P. D.,Shanahan, F.,O'Mahony, C.,Marchesi, J. R. (2006) 'Culture-independent analyses of temporal variation of the dominant fecal microbiota and targeted bacterial subgroups in Crohn's disease'. Journal of Clinical Microbiology, 44 (11):3980-3988   [Details]
	(2006)	'Bcl-x(L) expression in vivo in rheumatoid synovium' Busteed, S.,Bennett, M. W.,Molloy, C.,Houston, A.,Stone, M. A.,Shanahan, F.,Molloy, M. G.,O'Connell, J. (2006) 'Bcl-x(L) expression in vivo in rheumatoid synovium'. Clinical Rheumatology, 25 (6):789-793   [Details]
	(2006)	'The gut flora as a forgotten organ' O'Hara, A. M.,Shanahan, F. (2006) 'The gut flora as a forgotten organ'. EMBO Rep, 7 (77):688-693688   [Details]
	(2006)	'Determinants of vitamin D status in adult Crohn's disease patients, with particular emphasis on supplemental vitamin D use' Gilman, J.,Shanahan, F.,Cashman, K. D. (2006) 'Determinants of vitamin D status in adult Crohn's disease patients, with particular emphasis on supplemental vitamin D use'. European Journal of Clinical Nutrition, 60 (7):889-896   [Details]
	(2006)	'Role of interleukin (IL-10) in probiotic-mediated immune modulation: an assessment in wild-type and IL-10 knock-out mice' Sheil, B.,MacSharry, J.,O'Callaghan, L.,O'Riordan, A.,Waters, A.,Morgan, J.,Collins, J. K.,O'Mahony, L.,Shanahan, F. (2006) 'Role of interleukin (IL-10) in probiotic-mediated immune modulation: an assessment in wild-type and IL-10 knock-out mice'. Clin Exp Immunolclin Exp Immunol, 144 (2):273-280   [Details]
	(2006)	'Multireplicon genome architecture of Lactobacillus salivarius' Claesson, M. J.,Li, Y.,Leahy, S.,Canchaya, C.,van Pijkeren, J. P.,Cerdeno-Tarraga, A. M.,Parkhill, J.,Flynn, S.,O'Sullivan, G. C.,Collins, J. K.,Higgins, D.,Shanahan, F.,Fitzgerald, G. F.,van Sinderen, D.,O'Toole, P. W. (2006) 'Multireplicon genome architecture of Lactobacillus salivarius'. Proc Natl Acad Sci U S Aproc Natl Acad Sci U S A, 103 (17):6718-6723   [Details]
	(2006)	'Altered levels of biochemical indices of bone turnover and bone-related vitamins in patients with Crohn's disease and ulcerative colitis' Gilman, J.,Shanahan, F.,Cashman, K. D. (2006) 'Altered levels of biochemical indices of bone turnover and bone-related vitamins in patients with Crohn's disease and ulcerative colitis'. Alimentary Pharmacology & Therapeutics, 23 (7):1007-1016   [Details]
	(2006)	'CD38 is associated with premenopausal and postmenopausal bone mineral density and postmenopausal bone loss' Drummond, F. J.,Mackrill, J. J.,O'Sullivan, K.,Daly, M.,Shanahan, F.,Molloy, M. G. (2006) 'CD38 is associated with premenopausal and postmenopausal bone mineral density and postmenopausal bone loss'. Journal of Bone and Mineral Metabolism, 24 (1):28-35   [Details]
	(2006)	'Efficacy of an encapsulated probiotic Bifidobacterium infantis 35624 in women with irritable bowel syndrome' Whorwell, P. J.,Altringer, L.,Morel, J.,Bond, Y.,Charbonneau, D.,O'Mahony, L.,Kiely, B.,Shanahan, F.,Quigley, E. M. (2006) 'Efficacy of an encapsulated probiotic Bifidobacterium infantis 35624 in women with irritable bowel syndrome'. Am J Gastroenterolam J Gastroenterol, 101 (7):1581-1590 [Details]
	(2006)	'Fas ligand expression in human and mouse cancer cell lines; a caveat on over-reliance on mRNA data' Ryan, A. E.,Lane, S.,Shanahan, F.,O'Connell, J.,Houston, A. M. (2006) 'Fas ligand expression in human and mouse cancer cell lines; a caveat on over-reliance on mRNA data'. J Carcinog, 5 [Details]
	(2006)	'Differential cytokine response from dendritic cells to commensal and pathogenic bacteria in different lymphoid compartments in humans' O'Mahony, L.,O'Callaghan, L.,McCarthy, J.,Shilling, D.,Scully, P.,Sibartie, S.,Kavanagh, E.,Kirwan, W. O.,Redmond, H. P.,Collins, J. K.,Shanahan, F.; (2006) 'Differential cytokine response from dendritic cells to commensal and pathogenic bacteria in different lymphoid compartments in humans'. American Journal Of Physiology-Gastrointestinal And Liver Physiology, 290 (4)   [Details]
	(2005)	'The mycobacteria story in Crohn's disease' Shanahan, F.,O'Mahony, J. (2005) 'The mycobacteria story in Crohn's disease'. American Journal of Gastroenterology, 100 (7):1537-1538   [Details]
	(2005)	'A strategy for obtaining near full-length HCV cDNA clones (assemblicons) by assembly PCR' Sheehy, P.,Scallan, M.,Kenny-Walsh, E.,Shanahan, F.,Fanning, L. J. (2005) 'A strategy for obtaining near full-length HCV cDNA clones (assemblicons) by assembly PCR'. Journal of Virological Methods, 123 (2):115-124   [Details]
	(2005)	'Correlation of probiotic Lactobacillus salivarius growth phase with its cell wall-associated proteome' Kelly, P.,Maguire, P. B.,Bennett, M.,Fitzgerald, D. J.,Edwards, R. J.,Thiede, B.,Treumann, A.,Collins, J. K.,O'Sullivan, G. C.,Shanahan, F.,Dunne, C. (2005) 'Correlation of probiotic Lactobacillus salivarius growth phase with its cell wall-associated proteome'. Fems Microbiology Letters, 252 (1):153-159 [Details]
	(2005)	'Physiological basis for novel drug therapies used to treat the inflammatory bowel diseases I. Pathophysiological basis and prospects for probiotic therapy in inflammatory bowel disease' Shanahan, F. (2005) 'Physiological basis for novel drug therapies used to treat the inflammatory bowel diseases I. Pathophysiological basis and prospects for probiotic therapy in inflammatory bowel disease'. Am J Physiol Gastrointest Liver Physiol, 288 (33) [Details]
	(2005)	'IgG-mediated food intolerance in irritable bowel syndrome: a real phenomenon or an epiphenomenom?' Shanahan, F.,Whorwell, P. J. (2005) 'IgG-mediated food intolerance in irritable bowel syndrome: a real phenomenon or an epiphenomenom?'. Am J Gastroenterol, 100 (77):1558-9 [Details]
	(2005)	'Lactobacillus and bifidobacterium in irritable bowel syndrome: symptom responses and relationship to cytokine profiles' O'Mahony, L.,McCarthy, J.,Kelly, P.,Hurley, G.,Luo, F.,Chen, K.,O'Sullivan, G. C.,Kiely, B.,Collins, J. K.,Shanahan, F.,Quigley, E. M. (2005) 'Lactobacillus and bifidobacterium in irritable bowel syndrome: symptom responses and relationship to cytokine profiles'. Gastroenterology, 128 (3):541-551 [Details]
	(2005)	'Probiotics: an emerging therapy' O'Sullivan, G. C.,Kelly, P.,O'Halloran, S.,Collins, C.,Collins, J. K.,Dunne, C.,Shanahan, F. (2005) 'Probiotics: an emerging therapy'. Curr Pharm Des, 11 (11):3-10 [Details]
	(2005)	'Addressing the Fas counterattack controversy: blocking fas ligand expression suppresses tumor immune evasion of colon cancer in vivo' Ryan, A. E.,Shanahan, F.,O'Connell, J.,Houston, A. M. (2005) 'Addressing the Fas counterattack controversy: blocking fas ligand expression suppresses tumor immune evasion of colon cancer in vivo'. Cancer Research, 65 (21):9817-9823 [Details]
	(2005)	'Targeting the Fas/Fas ligand pathway in cancer' O'Brien, D. I.,Nally, K.,Kelly, R. G.,O'Connor, T. M.,Shanahan, F.,O'Connell, J. (2005) 'Targeting the Fas/Fas ligand pathway in cancer'. Expert Opin Ther Targets, 9 (55):1031-10441031   [Details]
	(2004)	'The role of substance P in inflammatory disease' O'Connor, T. M.,O'Connell, J.,O'Brien, D. I.,Goode, T.,Bredin, C. P.,Shanahan, F. (2004) 'The role of substance P in inflammatory disease'. J Cell Physiol, 201 (22):167-180167   [Details]
	(2004)	'Role for BRG1 in cell cycle control and tumor suppression' Hendricks, K. B.,Shanahan, F.,Lees, E. (2004) 'Role for BRG1 in cell cycle control and tumor suppression'. Mol Cell Biol, 24 (11):362-376362   [Details]
	(2004)	'Is the mucosal route of administration essential for probiotic function? Subcutaneous administration is associated with attenuation of murine colitis and arthritis' Sheil, B.,McCarthy, J.,O'Mahony, L.,Bennett, M. W.,Ryan, P.,Fitzgibbon, J. J.,Kiely, B.,Collins, J. K.,Shanahan, F. (2004) 'Is the mucosal route of administration essential for probiotic function? Subcutaneous administration is associated with attenuation of murine colitis and arthritis'. Gut, 53 (5):694-700   [Details]
	(2004)	'Persistence of hepatitis C virus in a white population: associations with human leukocyte antigen class 1' Fanning, L. J.,Kenny-Walsh, E.,Shanahan, F. (2004) 'Persistence of hepatitis C virus in a white population: associations with human leukocyte antigen class 1'. Human Immunology, 65 (7):745-751 [Details]
	(2004)	'Clinical examination of the gastrointestinal system in the 21st century--is the emphasis right?' Sibartie, V.,Shanahan, F. (2004) 'Clinical examination of the gastrointestinal system in the 21st century--is the emphasis right?'. Am J Gastroenterol, 99 (1010):1874-5 [Details]
	(2004)	'Celiac disease and the transition from childhood to adulthood: a 28-year follow-up' O'Leary, C.,Wieneke, P.,Healy, M.,Cronin, C.,O'Regan, P.,Shanahan, F. (2004) 'Celiac disease and the transition from childhood to adulthood: a 28-year follow-up'. Am J Gastroenterolam J Gastroenterol, 99 (12):2437-2441 [Details]
	(2004)	'Thromboembolism--an important manifestation of inflammatory bowel disease' Quera, R.,Shanahan, F. (2004) 'Thromboembolism--an important manifestation of inflammatory bowel disease'. Am J Gastroenterol, 99 (1010):1971-3 [Details]
	(2004)	'Bacterial DNA within granulomas of patients with Crohn's disease--detection by laser capture microdissection and PCR' Ryan, P.,Kelly, R. G.,Lee, G.,Collins, J. K.,O'Sullivan, G. C.,O'Connell, J.,Shanahan, F. (2004) 'Bacterial DNA within granulomas of patients with Crohn's disease--detection by laser capture microdissection and PCR'. American Journal of Gastroenterology, 99 (8):1539-1543 [Details]
	(2004)	'Making microbes work for mankind--clever trick or a glimpse of the future for IBD treatment?' Shanahan, F. (2004) 'Making microbes work for mankind--clever trick or a glimpse of the future for IBD treatment?'. Gastroenterology, 127 (2):667-668 [Details]
	(2004)	'Probiotics and the immune response: how much can we expect?' Shanahan, F. (2004) 'Probiotics and the immune response: how much can we expect?'. J Pediatr Gastroenterol Nutr, 39 Suppl 3 [Details]
	(2004)	'Probiotics in inflammatory bowel disease--therapeutic rationale and role' Shanahan, F. (2004) 'Probiotics in inflammatory bowel disease--therapeutic rationale and role'. Adv Drug Deliv Rev, 56 (66):809-18 [Details]
	(2004)	'CON: surveillance for ulcerative colitis-associated cancer: time to change the endoscopy and the microscopy' Shanahan, F.,Quera, R. (2004) 'CON: surveillance for ulcerative colitis-associated cancer: time to change the endoscopy and the microscopy'. Am J Gastroenterol, 99 (99):1633-6 [Details]
	(2004)	'Substance P and other neuropeptides do not induce mediator release in isolated human intestinal mast cells' Bischoff, S. C.,Schwengberg, S.,Lorentz, A.,Manns, M. P.,Bektas, H.,Sann, H.,Levi-Schaffer, F.,Shanahan, F.,Schemann, M. (2004) 'Substance P and other neuropeptides do not induce mediator release in isolated human intestinal mast cells'. Neurogastroenterology and Motility, 16 (2):185-193   [Details]
	(2004)	'Do Taq-generated RT-PCR products from RNA viruses accurately reflect viral genetic heterogeneity?' Mullan, B.,Sheehy, P.,Shanahan, F.,Fanning, L. (2004) 'Do Taq-generated RT-PCR products from RNA viruses accurately reflect viral genetic heterogeneity?'. Journal of Viral Hepatitis, 11 (2):108-114   [Details]
	(2004)	'Prevalence of bone marrow micrometastases in esophagogastric cancer patients with and without neoadjuvant chemoradiotherapy' Ryan, P.,McCarthy, S.,Kelly, J.,Collins, J. K.,Dunne, C.,Grogan, L.,Breathnach, O.,Shanahan, F.,Carey, P. D.,Walsh, T. N.,O'Sullivan, G. C. (2004) 'Prevalence of bone marrow micrometastases in esophagogastric cancer patients with and without neoadjuvant chemoradiotherapy'. Journal of Surgical Research, 117 (1):121-126   [Details]
	(2004)	'Host-flora interactions in inflammatory bowel disease' Shanahan, F. (2004) 'Host-flora interactions in inflammatory bowel disease'. Inflamm Bowel Dis, 10   [Details]
	(2004)	'Vitamin K status in patients with Crohn's disease and relationship to bone turnover' Duggan, P.,O'Brien, M.,Kiely, M.,McCarthy, J.,Shanahan, F.,Cashman, K. D. (2004) 'Vitamin K status in patients with Crohn's disease and relationship to bone turnover'. American Journal of Gastroenterology, 99 (11):2178-2185   [Details]
	(2003)	'Oral immune tolerance to tumor specific antigens may confer growth advantage to esophageal and gastric cancers' O'Brien, M. G.,Collins, C. G.,Collins, J. K.,Shanahan, F.,O'Sullivan, G. C. (2003) 'Oral immune tolerance to tumor specific antigens may confer growth advantage to esophageal and gastric cancers'. Dis Esophagus, 16 (3):218-223   [Details]
	(2003)	'Manipulation of the bacterial flora in inflammatory bowel disease' Marteau, P.,Seksik, P.,Shanahan, F. (2003) 'Manipulation of the bacterial flora in inflammatory bowel disease'. Best Pract Res Clin Gastroenterol, 17 (11):47-61 [Details]
	(2003)	'Basic aspects and pharmacology of probiotics: an overview of pharmacokinetics, mechanisms of action and side-effects' Marteau, P.,Shanahan, F. (2003) 'Basic aspects and pharmacology of probiotics: an overview of pharmacokinetics, mechanisms of action and side-effects'. Best Pract Res Clin Gastroenterol, 17 (55):725-40 [Details]
	(2003)	'Acromegaly and colorectal cancer: a comprehensive review of epidemiology, biological mechanisms, and clinical implications' Renehan, A. G.,O'Connell, J.,O'Halloran, D.,Shanahan, F.,Potten, C. S.,O'Dwyer, S. T.,Shalet, S. M. (2003) 'Acromegaly and colorectal cancer: a comprehensive review of epidemiology, biological mechanisms, and clinical implications'. Horm Metab Res, 35 (11-1211-12):712-25 [Details]
	(2003)	'Probiotics: a perspective on problems and pitfalls' Shanahan, F. (2003) 'Probiotics: a perspective on problems and pitfalls'. Scand J Gastroenterol Suppl, (237237):34-6 [Details]
	(2003)	'Screening for asymptomatic celiac disease among patients referred for bone densitometry measurement' Drummond, FJ., Annis, P., O'Sullivan, K., Wynne, F., Daly, M., Shanahan, F., Quane, KA., Molloy, M.G. (2003) 'Screening for asymptomatic celiac disease among patients referred for bone densitometry measurement'. Bone, 33 (6):970-974 [Details]
	(2003)	'Fas ligand expressed in colon cancer is not associated with increased apoptosis of tumor cells in vivo' Houston, A.,Waldron-Lynch, F. D.,Bennett, M. W.,Roche, D.,O'Sullivan, G. C.,Shanahan, F.,O'Connell, J. (2003) 'Fas ligand expressed in colon cancer is not associated with increased apoptosis of tumor cells in vivo'. International Journal of Cancer, 107 (2):209-214   [Details]
	(2003)	'Fas ligand mediates immune privilege and not inflammation in human colon cancer, irrespective of TGF-beta expression' Houston, A.,Bennett, M. W.,O'Sullivan, G. C.,Shanahan, F.,O'Connell, J. (2003) 'Fas ligand mediates immune privilege and not inflammation in human colon cancer, irrespective of TGF-beta expression'. British Journal of Cancer, 89 (7):1345-1351   [Details]
	(2003)	'Neurokinin-1 receptor (NK-1R) expression is induced in human colonic epithelial cells by proinflammatory cytokines and mediates proliferation in response to substance P' Goode, T.,O'Connor, T.,Hopkins, A.,Moriarty, D.,O'Sullivan, G. C.,Collins, J. K.,O'Donoghue, D.,Baird, A. W.,O'Connell, J.,Shanahan, F. (2003) 'Neurokinin-1 receptor (NK-1R) expression is induced in human colonic epithelial cells by proinflammatory cytokines and mediates proliferation in response to substance P'. Journal Of Cellular Physiology, 197 (1):30-41   [Details]
	(2003)	'Upregulation of neurokinin-1 receptor expression in the lungs of patients with sarcoidosis' O'Connor, T. M.,O'Connell, J.,O'Brien, D. I.,Bennett, M. W.,Goode, T.,Burke, L.,Bredin, C. P.,Shanahan, F. (2003) 'Upregulation of neurokinin-1 receptor expression in the lungs of patients with sarcoidosis'. Journal Of Clinical Immunology, 23 (5):425-435   [Details]
	(2003)	'Is nutrition an aetiological factor for inflammatory bowel disease?' Cashman, K. D.,Shanahan, F. (2003) 'Is nutrition an aetiological factor for inflammatory bowel disease?'. Eur J Gastroenterol Hepatol, 15 (66):607-613607   [Details]
	(2003)	'Suggestive linkage of 2p22-25 and 11q12-13 with low bone mineral density at the lumbar spine in the Irish population' Wynne, F.,Drummond, F. J.,Daly, M.,Brown, M.,Shanahan, F.,Molloy, M. G.,Quane, K. A. (2003) 'Suggestive linkage of 2p22-25 and 11q12-13 with low bone mineral density at the lumbar spine in the Irish population'. Calcified Tissue International, 72 (6):651-658   [Details]
	(2003)	'The prophylactic use of a proton pump inhibitor before food and alcohol' O'Leary, C.,McCarthy, J.,Humphries, M.,Shanahan, F.,Quigley, E. (2003) 'The prophylactic use of a proton pump inhibitor before food and alcohol'. Alimentary Pharmacology & Therapeutics, 17 (5):683-686   [Details]
	(2003)	'Association of NOD2 with Crohn's disease in a homogenous Irish population' Bairead, E.,Harmon, D. L.,Curtis, A. M.,Kelly, Y.,O'Leary, C.,Gardner, M.,Leahy, D. T.,Vaughan, P.,Keegan, D.,O'Morain, C.,O'Donoghue, D.,Shanahan, F.,Parfrey, N. A.,Quane, K. A. (2003) 'Association of NOD2 with Crohn's disease in a homogenous Irish population'. European Journal of Human Genetics, 11 (3):237-244   [Details]
	(2003)	'Exploring the iceberg--the spectrum of celiac disease' Cronin, C. C.,Shanahan, F. (2003) 'Exploring the iceberg--the spectrum of celiac disease'. American Journal of Gastroenterology, 98 (3):518-520 [Details]
	(2002)	'The prevalence of coeliac disease among female subjects having bone densitometry' O'Leary, C.,Feighery, C.,Feighery, A.,Quane, K.,Shanahan, F.,Molloy, M.,Cronin, C. C. (2002) 'The prevalence of coeliac disease among female subjects having bone densitometry'. Irish Journal Of Medical Scienceirish Journal Of Medical Science, 171 (3):145-147   [Details]
	(2002)	'Genotoxicity of fecal water in a free-living Irish population' Woods, J. A.,Dunne, C.,Collins, J. K.,Shanahan, F.,O'Brien, N. M. (2002) 'Genotoxicity of fecal water in a free-living Irish population'. Nutrition and Cancer, 42 (1):62-69   [Details]
	(2002)	'Activation of the p38 MAPK and ERK1/2 pathways is required for Fas-induced IL-8 production in colonic epithelial cells' O'Brien, D.,O'Connor, T.,Shanahan, F.,O'Connell, J. (2002) 'Activation of the p38 MAPK and ERK1/2 pathways is required for Fas-induced IL-8 production in colonic epithelial cells'. Cell Signaling, Transcription, and Translation as Therapeutic Targets, 973 :161-165161   [Details]
	(2002)	'Role of probiotics in the treatment of intestinal infections and inflammation' Dunne, C.,Shanahan, F. (2002) 'Role of probiotics in the treatment of intestinal infections and inflammation'. Curr Opin Gastroenterol, 18 (11):40-4540   [Details]
	(2002)	'Gut flora in gastrointestinal disease' Shanahan, F. (2002) 'Gut flora in gastrointestinal disease'. European Journal of Surgery, 168 :47-5247   [Details]
	(2002)	'Nested RT-PCR. Sensitivity controls are essential to determine the biological significance of detected mRNA' Goode, T.,Ho, W. Z.,O'Connor, T.,Busteed, S.,Douglas, S. D.,Shanahan, F.,O'Connell, J. (2002) 'Nested RT-PCR. Sensitivity controls are essential to determine the biological significance of detected mRNA'. Methods Mol Biol, 193 :65-79 [Details]
	(2002)	'Type I insulin-like growth factor receptor expression on colorectal adenocarcinoma cell lines is decreased in response to the chemopreventive agent N-acetyl-l-cysteine' Kelly, R. G.,Nally, K.,Shanahan, F.,O'Connell, J. (2002) 'Type I insulin-like growth factor receptor expression on colorectal adenocarcinoma cell lines is decreased in response to the chemopreventive agent N-acetyl-l-cysteine'. Ann N Y Acad Sci, 973 :555-8 [Details]
	(2002)	'RT-PCR for the assessment of genetically heterogenous populations of the hepatitis C virus' Mullan, B.,Fanning, L. J.,Shanahan, F.,Sullivan, D. G. (2002) 'RT-PCR for the assessment of genetically heterogenous populations of the hepatitis C virus'. Methods Mol Biol, 193 :171-88 [Details]
	(2002)	'Sulfate-reducing bacteria colonize pouches formed for ulcerative colitis but not for familial adenomatous polyposis' Duffy, M.,O'Mahony, L.,Coffey, J. C.,Collins, J. K.,Shanahan, F.,Redmond, H. P.,Kirwan, W. O.; (2002) 'Sulfate-reducing bacteria colonize pouches formed for ulcerative colitis but not for familial adenomatous polyposis'. Diseases of The Colon & Rectum, 45 (3):384-388   [Details]
	(2002)	'Crohn's disease' Shanahan, F. (2002) 'Crohn's disease'. Lancet, 359 (9300):62-69 [Details]
	(2002)	'The host-microbe interface within the gut' Shanahan, F. (2002) 'The host-microbe interface within the gut'. Best Practice & Research in Clinical Gastroenterology, 16 (6):915-931 [Details]
	(2002)	'Coeliac disease and autoimmune Addison's disease: a clinical pitfall' O'Leary, C.,Walsh, C. H.,Wieneke, P.,O'Regan, P.,Buckley, B.,O'Halloran, D. J.,Ferriss, J. B.,Quigley, E. M.,Annis, P.,Shanahan, F.,Cronin, C. C. (2002) 'Coeliac disease and autoimmune Addison's disease: a clinical pitfall'. Quarterly Journal of Medicine, 95 (2):79-82 [Details]
	(2002)	'Celiac disease and irritable bowel-type symptoms' O'Leary, C.,Wieneke, P.,Buckley, S.,O'Regan, P.,Cronin, C. C.,Quigley, E. M.,Shanahan, F. (2002) 'Celiac disease and irritable bowel-type symptoms'. Am J Gastroenterolam J Gastroenterol, 97 (6):1463-1467 [Details]
	(2002)	'Food allergies' O'Leary, P. F.,Shanahan, F. (2002) 'Food allergies'. Curr Gastroenterol Rep, 4 (55):373-82 [Details]
	(2002)	'Mycobacterium paratuberculosis detected by nested PCR in intestinal granulomas isolated by LCM in cases of Crohn's disease' Ryan, P.,Aarons, S.,Bennett, M. W.,Lee, G.,O'Sullivan, G. C.,O'Connell, J.,Shanahan, F. (2002) 'Mycobacterium paratuberculosis detected by nested PCR in intestinal granulomas isolated by LCM in cases of Crohn's disease'. Methods Mol Biol, 193 :205-11 [Details]
	(2002)	'PCR detection of Mycobacterium paratuberculosis in Crohn's disease granulomas isolated by laser capture microdissection' Ryan, P.,Bennett, M. W.,Aarons, S.,Lee, G.,Collins, J. K.,O'Sullivan, G. C.,O'Connell, J.,Shanahan, F. (2002) 'PCR detection of Mycobacterium paratuberculosis in Crohn's disease granulomas isolated by laser capture microdissection'. Gut, 51 (5):665-670   [Details]
	(2002)	'Probiotics and inflammatory bowel disease: from fads and fantasy to facts and future' Shanahan, F. (2002) 'Probiotics and inflammatory bowel disease: from fads and fantasy to facts and future'. British Journal of Nutrition, 88   [Details]
	(2002)	'Soluble interleukin 2 receptor levels in families of people with schizophrenia' Gaughran, F.,O'Neill, E.,Sham, P.,Daly, R. J.,Shanahan, F. (2002) 'Soluble interleukin 2 receptor levels in families of people with schizophrenia'. Schizophrenia Research, 56 (3):235-239   [Details]
	(2002)	'Investigation of the genetic influence of the OPG, VDR (Fok1), and COLIA1 Sp1 polymorphisms on BMD in the Irish population' Wynne, F., Drummond, F., O'Sullivan, K., Daly, M., Shanahan, F., Molloy, M.G. ,Quane, K.A. (2002) 'Investigation of the genetic influence of the OPG, VDR (Fok1), and COLIA1 Sp1 polymorphisms on BMD in the Irish population'. Calcified Tissue International, 71 (1):26-35 [Details]
	(2001)	'Immune privilege or inflammation? Insights into the Fas ligand enigma' O'Connell, J.,Houston, A.,Bennett, M. W.,O'Sullivan, G. C.,Shanahan, F. (2001) 'Immune privilege or inflammation? Insights into the Fas ligand enigma'. Nat Med, 7 (33):271-4 [Details]
	(2001)	'p53 at the crossroads of colitis and cancer' O'Riordan, A.,Shanahan, F. (2001) 'p53 at the crossroads of colitis and cancer'. Gastroenterology, 120 (77):1877-8 [Details]
	(2001)	'Mutant salmonella as vectors for gene therapy' O'Sullivan, G. C.,Aarons, S. J.,Shanahan, F. (2001) 'Mutant salmonella as vectors for gene therapy'. Gastroenterology, 121 (11):224-6 [Details]
	(2001)	'Turbo probiotics for IBD' Shanahan, F. (2001) 'Turbo probiotics for IBD'. Gastroenterology, 120 (55):1297-8 [Details]
	(2001)	'Inflammatory bowel disease: immunodiagnostics, immunotherapeutics, and ecotherapeutics' Shanahan, F. (2001) 'Inflammatory bowel disease: immunodiagnostics, immunotherapeutics, and ecotherapeutics'. Gastroenterology, 120 (33):622-35 [Details]
	(2001)	'Soluble interleukin 2 receptor levels in acute and stable schizophrenia' Gaughran, F.,O'Neill, E.,Sham, P.,Daly, R. J.,Shanahan, F. (2001) 'Soluble interleukin 2 receptor levels in acute and stable schizophrenia'. Schizophr Res, 52 (1-21-2):143-144143   [Details]
	(2001)	'Anemia in patients with chronic inflammatory bowel disease' Cronin, C. C.,Shanahan, F. (2001) 'Anemia in patients with chronic inflammatory bowel disease'. 96 (88):2296-22982296   [Details]
	(2001)	'Fas ligand upregulation is an early event in colonic carcinogenesis' Bennett, M. W.,O'Connell, J.,Houston, A.,Kelly, J.,O'Sullivan, G. C.,Collins, J. K.,Shanahan, F. (2001) 'Fas ligand upregulation is an early event in colonic carcinogenesis'. Journal of Clinical Pathology, 54 (8):598-604   [Details]
	(2001)	'Probiotic impact on microbial flora, inflammation and tumour development in IL-10 knockout mice' O'Mahony, L.,Feeney, M.,O'Halloran, S.,Murphy, L.,Kiely, B.,Fitzgibbon, J.,Lee, G.,O'Sullivan, G.,Shanahan, F.,Collins, J. K. (2001) 'Probiotic impact on microbial flora, inflammation and tumour development in IL-10 knockout mice'. Alimentary Pharmacology & Therapeutics, 15 (8):1219-1225   [Details]
	(2001)	'Upregulation of Fas-Fas-L (CD95/CD95L)-mediated epithelial apoptosis--a putative role in pouchitis?' Coffey, J. C.,Bennett, M. W.,Wang, J. H.,O'Connell, J.,Neary, P.,Shanahan, F.,Redmond, H. P.,Kirwan, W. O. (2001) 'Upregulation of Fas-Fas-L (CD95/CD95L)-mediated epithelial apoptosis--a putative role in pouchitis?'. Journal of Surgical Research, 98 (1):27-32 [Details]
	(2001)	'Why is celiac disease so common in Ireland?' Cronin, C. C.,Shanahan, F. (2001) 'Why is celiac disease so common in Ireland?'. Perspect Biol Med, 44 (33):342-352342   [Details]
	(2001)	'Constitutive ERK1/2 activation in esophagogastric rib bone marrow micrometastatic cells is MEK-independent' Barry, O. P.,Mullan, B.,Sheehan, D.,Kazanietz, M. G.,Shanahan, F.,Collins, J. K.,O'Sullivan, G. C. (2001) 'Constitutive ERK1/2 activation in esophagogastric rib bone marrow micrometastatic cells is MEK-independent'. Journal of Biological Chemistry, 276 (181):15537-15546   [Details]
	(2001)	'Probiotics in inflamatory bowel disease' Shanahan, F. (2001) 'Probiotics in inflamatory bowel disease'. Gut, 48 (55):609-609609   [Details]
	(2001)	'Inferred hepatitis C virus quasispecies diversity is influenced by choice of DNA polymerase in reverse transcriptase-polymerase chain reactions' Mullan, B.,Kenny-Walsh, E.,Collins, J. K.,Shanahan, F.,Fanning, L. J. (2001) 'Inferred hepatitis C virus quasispecies diversity is influenced by choice of DNA polymerase in reverse transcriptase-polymerase chain reactions'. Analytical Biochemistry, 289 (2):137-146   [Details]
	(2001)	'In vitro selection criteria for probiotic bacteria of human origin: correlation with in vivo findings' Dunne, C.,O'Mahony, L.,Murphy, L.,Thornton, G.,Morrissey, D.,O'Halloran, S.,Feeney, M.,Flynn, S.,Fitzgerald, G.,Daly, C.,Kiely, B.,O 'Sullivan, G. C.,Shanahan, F.,Collins, J. K. (2001) 'In vitro selection criteria for probiotic bacteria of human origin: correlation with in vivo findings'. 73 (22)   [Details]
	(2001)	'Strategy for the maximization of clinically relevant information from hepatitis C virus, RT-PCR quantification' Levis, J., Kenny-Walsh, E., O'Sullivan, K., Horgan, M., Whelton, M., Shanahan, F., Fanning, LJ. (2001) 'Strategy for the maximization of clinically relevant information from hepatitis C virus, RT-PCR quantification'. Journal of Clinical Virology, 20 (3):163-171 [Details]
	(2001)	'Relation between colitis and colon cancer' Shanahan, F. (2001) 'Relation between colitis and colon cancer'. Lancet, 357 (92529252):246-247246   [Details]
	(2000)	'Immunological and genetic links in Crohn's disease' Shanahan, F. (2000) 'Immunological and genetic links in Crohn's disease'. Gut, 46 (11):6-76   [Details]
	(2000)	'The inflammatory response within Dukes' B colorectal cancers: implications for progression of micrometastases and patient survival' Murphy, J.,O'Sullivan, G. C.,Lee, G.,Madden, M.,Shanahan, F.,Collins, J. K.,Talbot, I. C. (2000) 'The inflammatory response within Dukes' B colorectal cancers: implications for progression of micrometastases and patient survival'. American Journal of Gastroenterology, 95 (12):3607-3614 [Details]
	(2000)	'Esophagogastric cancer--time to change the paradigm' O'Sullivan, G. C.,Shanahan, F. (2000) 'Esophagogastric cancer--time to change the paradigm'. Am J Gastroenterol, 95 (99):2153-4 [Details]
	(2000)	'Immunology. Therapeutic manipulation of gut flora' Shanahan, F. (2000) 'Immunology. Therapeutic manipulation of gut flora'. Science, 289 (54835483):1311-2 [Details]
	(2000)	'Anti-TNF therapy for Crohn's disease: a perspective (infliximab is not the drug we have been waiting for)' Shanahan, F. (2000) 'Anti-TNF therapy for Crohn's disease: a perspective (infliximab is not the drug we have been waiting for)'. Inflamm Bowel Dis, 6 (22):137-9 [Details]
	(2000)	'Probiotics and inflammatory bowel disease: is there a scientific rationale?' Shanahan, F. (2000) 'Probiotics and inflammatory bowel disease: is there a scientific rationale?'. Inflamm Bowel Dis, 6 (22):107-15 [Details]
	(2000)	'Nutrient tasting and signaling mechanisms in the gut V. Mechanisms of immunologic sensation of intestinal contents' Shanahan, F. (2000) 'Nutrient tasting and signaling mechanisms in the gut V. Mechanisms of immunologic sensation of intestinal contents'. Am J Physiol Gastrointest Liver Physiol, 278 (22) [Details]
	(2000)	'Functional foods and probiotics: time for gastroenterologists to embrace the concept' Shanahan, F.,McCarthy, J. (2000) 'Functional foods and probiotics: time for gastroenterologists to embrace the concept'. Curr Gastroenterol Rep, 2 (55):345-6 [Details]
	(2000)	'Turning on T-cell death and turning off Crohn's disease' Shanahan, F.,Nally, K.,O'Sullivan, G. C. (2000) 'Turning on T-cell death and turning off Crohn's disease'. Gastroenterology, 119 (44):1166-8 [Details]
	(2000)	'Gene therapy for food allergy' Shanahan, F.,O'Sullivan, G. C. (2000) 'Gene therapy for food allergy'. Gastroenterology, 119 (11):269-70 [Details]
	(2000)	'How do intestinal T cells sense the dietary and microbial environment?' Shanahan, F.,O'Sullivan, G. C. (2000) 'How do intestinal T cells sense the dietary and microbial environment?'. Gastroenterology, 118 (22):444-6 [Details]
	(2000)	'Natural fluctuations of hepatitis C viral load in a homogeneous patient population: a prospective study' Fanning, L.,Kenny-Walsh, E.,Levis, J.,Choudhury, K. R.,Cannon, B.,Sheehan, M.,Whelton, M.,Shanahan, F. (2000) 'Natural fluctuations of hepatitis C viral load in a homogeneous patient population: a prospective study'. Hepatology, 31 (1):225-229   [Details]
	(2000)	'Viral clearance in hepatitis C (1b) infection: relationship with human leukocyte antigen class II in a homogeneous population' Fanning, L. J.,Levis, J.,Kenny-Walsh, E.,Wynne, F.,Whelton, M.,Shanahan, F. (2000) 'Viral clearance in hepatitis C (1b) infection: relationship with human leukocyte antigen class II in a homogeneous population'. Hepatology, 31 (6):1334-1337 [Details]
	(2000)	'Biological behaviour and clinical implications of micrometastases' Kell, M. R.,Winter, D. C.,O'Sullivan, G. C.,Shanahan, F.,Redmond, H. P.; (2000) 'Biological behaviour and clinical implications of micrometastases'. British Journal of Surgery, 87 (1212):1629-16391629   [Details]
	(2000)	'Interferon-gamma sensitizes colonic epithelial cell lines to physiological and therapeutic inducers of colonocyte apoptosis' O'Connell, J.,Bennett, M. W.,Nally, K.,O'Sullivan, G. C.,Collins, J. K.,Shanahan, F. (2000) 'Interferon-gamma sensitizes colonic epithelial cell lines to physiological and therapeutic inducers of colonocyte apoptosis'. Journal of Cell Physiology, 185 (3):331-338   [Details]
	(2000)	'Bone-marrow micrometastases in patients with brain metastases from epithelial cell tumours' Maguire, D.,O'Sullivan, G. C.,McNamara, B.,Collins, J. K.,Shanahan, F. (2000) 'Bone-marrow micrometastases in patients with brain metastases from epithelial cell tumours'. Quarterly Journal of Medicine, 93 (9):611-615   [Details]
	(2000)	'Pregnancy and pregnancy outcome in hepatitis C type 1b' Jabeen, T.,Cannon, B.,Hogan, J.,Crowley, M.,Devereux, C.,Fanning, L.,Kenny-Walsh, E.,Shanahan, F.,Whelton, M. J. (2000) 'Pregnancy and pregnancy outcome in hepatitis C type 1b'. Quarterly Journal of Medicine, 93 (9):597-601   [Details]
	(2000)	'Neurokinin-1 receptor expression in inflammatory bowel disease: molecular quantitation and localisation' Goode, T.,O'Connell, J.,Anton, P.,Wong, H.,Reeve, J.,O'Sullivan, G. C.,Collins, J. K.,Shanahan, F. (2000) 'Neurokinin-1 receptor expression in inflammatory bowel disease: molecular quantitation and localisation'. Gut, 47 (3):387-396   [Details]
	(2000)	'Bone marrow micrometastases and gastrointestinal cancer detection and significance' Maguire, D.,O'Sullivan, G. C.,Collins, J. K.,Morgan, J.,Shanahan, F. (2000) 'Bone marrow micrometastases and gastrointestinal cancer detection and significance'. 95 (77):1644-16511644   [Details]
	(2000)	'The stress response and the hypothalamic-pituitary-adrenal axis: from molecule to melancholia' O'Connor, T. M.,O'Halloran, D. J.,Shanahan, F. (2000) 'The stress response and the hypothalamic-pituitary-adrenal axis: from molecule to melancholia'. Qjm-Monthly Journal of the Association of Physicians, 93 (66):323-333323   [Details]
	(2000)	'Differential expression of neurokinin-1 receptor by human mucosal and peripheral lymphoid cells' Goode, T.,O'Connell, J.,Ho, W. Z.,O'Sullivan, G. C.,Collins, J. K.,Douglas, S. D.,Shanahan, F. (2000) 'Differential expression of neurokinin-1 receptor by human mucosal and peripheral lymphoid cells'. Clinical And Diagnostic Laboratory Immunology, 7 (3):371-376   [Details]
	(2000)	'Colorectal cancer: still a major killer despite progress on many fronts' Shanahan, F.,O'Sullivan, G. C.,O'Leary, C. (2000) 'Colorectal cancer: still a major killer despite progress on many fronts'. Qjm-Monthly Journal of the Association of Physicians, 93 (33):131-134131   [Details]
	(2000)	'Altered mechanisms of apoptosis in colon cancer: Fas resistance and counterattack in the tumor-immune conflict' O'Connell, J.,Bennett, M. W.,Nally, K.,Houston, A.,O'Sullivan, G. C.,Shanahan, F. (2000) 'Altered mechanisms of apoptosis in colon cancer: Fas resistance and counterattack in the tumor-immune conflict'. 910 :178-195178   [Details]
	(1999)	'Fas ligand and Fas receptor are coexpressed in normal human esophageal epithelium: a potential mechanism of apoptotic epithelial turnover' Bennett, M. W.,O'Connell, J.,O'Sullivan, G. C.,Roche, D.,Brady, C.,Collins, J. K.,Shanahan, F. (1999) 'Fas ligand and Fas receptor are coexpressed in normal human esophageal epithelium: a potential mechanism of apoptotic epithelial turnover'. Diseases of the Esophagus, 12 (2):90-98   [Details]
	(1999)	'Micrometastases in esophagogastric cancer: high detection rate in resected rib segments' O'Sullivan G, C.,Sheehan, D.,Clarke, A.,Stuart, R.,Kelly, J.,Kiely, M. D.,Walsh, T.,Collins, J. K.,Shanahan, F. (1999) 'Micrometastases in esophagogastric cancer: high detection rate in resected rib segments'. Gastroenterology, 116 (3):543-548 [Details]
	(1999)	'Escape from the Smad world by colon cancer' O'Sullivan, G. C.,Shanahan, F. (1999) 'Escape from the Smad world by colon cancer'. Gastroenterology, 116 (66):1496-7 [Details]
	(1999)	'Setback for systemic therapy of esophageal cancer: right concept, disappointing result' O'Sullivan, G. C.,Shanahan, F.,Talwalkar, J.,Van Dam, J. (1999) 'Setback for systemic therapy of esophageal cancer: right concept, disappointing result'. Gastroenterology, 117 (44):1020-2 [Details]
	(1999)	'Brain-gut axis and mucosal immunity: a perspective on mucosal psychoneuroimmunology' Shanahan, F. (1999) 'Brain-gut axis and mucosal immunity: a perspective on mucosal psychoneuroimmunology'. Semin Gastrointest Dis, 10 (11):8-13 [Details]
	(1999)	'Neurokinin antagonism and chemotherapy-induced emesis' Shanahan, F.,O'Sullivan, G. C. (1999) 'Neurokinin antagonism and chemotherapy-induced emesis'. Am J Gastroenterol, 94 (1111):3368-9 [Details]
	(1999)	'Glial cells, mucosal integrity, and inflammatory bowel disease' Shanahan, F.,Sullivan, G. C. (1999) 'Glial cells, mucosal integrity, and inflammatory bowel disease'. Gastroenterology, 116 (22):493-4 [Details]
	(1999)	'Regulation of G1/S transition in mammalian cells' Guevara, C.,Korver, W.,Mahony, D.,Parry, D.,Seghezzi, W.,Shanahan, F.,Lees, E. (1999) 'Regulation of G1/S transition in mammalian cells'. Kidney Int, 56 (44):1181-92 [Details]
	(1999)	'Type 1 diabetes mellitus, coeliac disease, and lymphoma: a report of four cases' O'Connor, T. M.,Cronin, C. C.,Loane, J. F.,O'Meara, N. M.,Firth, R. G.,Shanahan, F.,O'Halloran, D. J. (1999) 'Type 1 diabetes mellitus, coeliac disease, and lymphoma: a report of four cases'. Diabetic Medicine, 16 (7):614-617   [Details]
	(1999)	'An international survey of the use and attitudes regarding alternative medicine by patients with inflammatory bowel disease' Rawsthorne, P.,Shanahan, F.,Cronin, N. C.,Anton, P. A.,Lofberg, R.,Bohman, L.,Bernstein, C. N. (1999) 'An international survey of the use and attitudes regarding alternative medicine by patients with inflammatory bowel disease'. American Journal of Gastroenterology, 94 (5):1298-1303   [Details]
	(1999)	'Thrombosis, factor V Leiden, and inflammatory bowel disease' Shanahan, F. (1999) 'Thrombosis, factor V Leiden, and inflammatory bowel disease'. Gastroenterology, 116 (33):778-779778   [Details]
	(1999)	'Cyclin E associates with BAF155 and BRG1, components of the mammalian SWI-SNF complex, and alters the ability of BRG1 to induce growth arrest' Shanahan, F.,Seghezzi, W.,Parry, D.,Mahony, D.,Lees, E. (1999) 'Cyclin E associates with BAF155 and BRG1, components of the mammalian SWI-SNF complex, and alters the ability of BRG1 to induce growth arrest'. Mol Cell Biol, 19 (22):1460-14691460   [Details]
	(1999)	'Invasion by esophageal cancer cells: functional contribution of the urokinase plasminogen activation system, and inhibition by antisense oligonucleotides to urokinase or urokinase receptor' Morrissey, D.,O'Connell, J.,Lynch, D.,O'Sullivan, G. C.,Shanahan, F.,Collins, J. K. (1999) 'Invasion by esophageal cancer cells: functional contribution of the urokinase plasminogen activation system, and inhibition by antisense oligonucleotides to urokinase or urokinase receptor'. Clinical & Experimental Metastasis, 17 (1):77-85   [Details]
	(1999)	'Intestinal lymphoepithelial communication' Shanahan, F. (1999) 'Intestinal lymphoepithelial communication'. 473 :1-91   [Details]
	(1999)	'The Fas counterattack: cancer as a site of immune privilege' O'Connell, J.,Bennett, M. W.,O'Sullivan, G. C.,Collins, J. K.,Shanahan, F. (1999) 'The Fas counterattack: cancer as a site of immune privilege'. Immunol Today, 20 (11):46-5246   [Details]
	(1999)	'Resistance to Fas (APO-1/CD95)-mediated apoptosis and expression of Fas ligand in esophageal cancer: the Fas counterattack' O'Connell, J.,Bennett, M. W.,O'Sullivan, G. C.,Collins, J. K.,Shanahan, F. (1999) 'Resistance to Fas (APO-1/CD95)-mediated apoptosis and expression of Fas ligand in esophageal cancer: the Fas counterattack'. 12 (22):83-8983   [Details]
	(1999)	'Expression of Fas (CD95/APO-1) ligand by human breast cancers: significance for tumor immune privilege' O'Connell, J.,Bennett, M. W.,O'Sullivan, G. C.,O'Callaghan, J.,Collins, J. K.,Shanahan, F. (1999) 'Expression of Fas (CD95/APO-1) ligand by human breast cancers: significance for tumor immune privilege'. Clinical And Diagnostic Laboratory Immunology, 6 (4):457-463 [Details]
	(1998)	'Fas ligand expression in primary colon adenocarcinomas: evidence that the Fas counterattack is a prevalent mechanism of immune evasion in human colon cancer' O'Connell, J.,Bennett, M. W.,O'Sullivan, G. C.,Roche, D.,Kelly, J.,Collins, J. K.,Shanahan, F. (1998) 'Fas ligand expression in primary colon adenocarcinomas: evidence that the Fas counterattack is a prevalent mechanism of immune evasion in human colon cancer'. Journal of Pathology, 186 (3):240-246 [Details]
	(1998)	'Modelling the major histocompatibility complex susceptibility to RA using the MASC method' Genin, E.,Babron, M. C.,McDermott, M. F.,Mulcahy, B.,Waldron-Lynch, F.,Adams, C.,Clegg, D. O.,Ward, R. H.,Shanahan, F.,Molloy, M. G.,O'Gara, F.,Clerget-Darpoux, F. (1998) 'Modelling the major histocompatibility complex susceptibility to RA using the MASC method'. Genet Epidemiol, 15 (44):419-430419   [Details]
	(1998)	'Enteropathogenic E. coli: intimacy redefined' Shanahan, F.,O'Sullivan, G. C. (1998) 'Enteropathogenic E. coli: intimacy redefined'. Gastroenterology, 115 (11):233-4 [Details]
	(1998)	'Genes, bacteria, and T cells: ingredients for inflammatory bowel disease' Shanahan, F.,O'Sullivan, G. C.,Collins, J. K. (1998) 'Genes, bacteria, and T cells: ingredients for inflammatory bowel disease'. Gastroenterology, 115 (66):1595-6 [Details]
	(1998)	'Immuno-epithelial interactions: cytokine modulation of normal rabbit colonocyte function' Vidrich, A.,Anton, P. A.,Shanahan, F. (1998) 'Immuno-epithelial interactions: cytokine modulation of normal rabbit colonocyte function'. In Vitro Cellular & Developmental Biology-Animal, 34 (10):743-746 [Details]
	(1998)	'Neuroimmunomodulation in inflammatory bowel disease. How far from bench to bedside?' Anton, P. A.,Shanahan, F. (1998) 'Neuroimmunomodulation in inflammatory bowel disease. How far from bench to bedside?'. Ann N Y Acad Sci, 840 :723-34 [Details]
	(1998)	'The Fas counterattack in vivo: apoptotic depletion of tumor-infiltrating lymphocytes associated with Fas ligand expression by human esophageal carcinoma' Bennett, M. W.,O'Connell, J.,O'Sullivan, G. C.,Brady, C.,Roche, D.,Collins, J. K.,Shanahan, F. (1998) 'The Fas counterattack in vivo: apoptotic depletion of tumor-infiltrating lymphocytes associated with Fas ligand expression by human esophageal carcinoma'. Journal of Immunology, 160 (11):5669-5675 [Details]
	(1998)	'A significant step in the celiac puzzle' Cronin, C.,Shanahan, F. (1998) 'A significant step in the celiac puzzle'. Gastroenterology, 114 (66):1339-41 [Details]
	(1998)	'Immunological tests to monitor inflammatory bowel disease--have they delivered yet?' Cronin, C. C.,Shanahan, F. (1998) 'Immunological tests to monitor inflammatory bowel disease--have they delivered yet?'. Am J Gastroenterol, 93 (33):295-7 [Details]
	(1998)	'Increased soluble interleukin 2 receptor levels in schizophrenia' Gaughran, F.,O'Neill, E.,Cole, M.,Collins, K.,Daly, R. J.,Shanahan, F. (1998) 'Increased soluble interleukin 2 receptor levels in schizophrenia'. Schizophrenia Research, 29 (3):263-267 [Details]
	(1998)	'Substance P (neurokinin-1) receptor is a marker of human mucosal but not peripheral mononuclear cells: molecular quantitation and localization' Goode, T.,O'Connell, J.,Sternini, C.,Anton, P.,Wong, H.,O'Sullivan, G. C.,Collins, J. K.,Shanahan, F. (1998) 'Substance P (neurokinin-1) receptor is a marker of human mucosal but not peripheral mononuclear cells: molecular quantitation and localization'. Journal of Immunology, 161 (5):2232-2240 [Details]
	(1998)	'Cyclin E associates with components of the pre-mRNA splicing machinery in mammalian cells' Seghezzi, W.,Chua, K.,Shanahan, F.,Gozani, O.,Reed, R.,Lees, E. (1998) 'Cyclin E associates with components of the pre-mRNA splicing machinery in mammalian cells'. Mol Cell Biol, 18 (88):4526-45364526   [Details]
	(1998)	'Intestinal graft-versus-host disease' Shanahan, F. (1998) 'Intestinal graft-versus-host disease'. Gastroenterology, 115 (11):220-222220   [Details]
	(1998)	'Enteric neuropathophysiology and inflammatory bowel disease' Shanahan, F. (1998) 'Enteric neuropathophysiology and inflammatory bowel disease'. Neurogastroenterology and Motility, 10 (33):185-187185   [Details]
	(1998)	'Coeliac disease and epilepsy' Cronin, C. C.,Jackson, L. M.,Feighery, C.,Shanahan, F.,Abuzakouk, M.,Ryder, D. Q.,Whelton, M.,Callaghan, N. (1998) 'Coeliac disease and epilepsy'. Quarterly Journal of Medicine, 91 (4):303-308   [Details]
	(1998)	'Mucosal subepithelial binding sites for the bacterial chemotactic peptide, formyl-methionyl-leucyl-phenylalanine (FMLP)' Anton, P.,O'Connell, J.,O'Connell, D.,Whitaker, L.,O'Sullivan, G. C.,Collins, J. K.,Shanahan, F. (1998) 'Mucosal subepithelial binding sites for the bacterial chemotactic peptide, formyl-methionyl-leucyl-phenylalanine (FMLP)'. Gut, 42 (3):374-379   [Details]
	(1998)	'Quantitative measurement of mRNA expression by competitive RT-PCR' O'Connell, J.,Goode, T.,Shanahan, F. (1998) 'Quantitative measurement of mRNA expression by competitive RT-PCR'. Methods Mol Biol, 92 :183-93 [Details]
	(1997)	'Mucosal substance P receptor expression in HIV infection and inflammatory bowel disease' McGowan, I. M.,Fairhurst, R. M.,Shanahan, F.,Anton, P. A. (1997) 'Mucosal substance P receptor expression in HIV infection and inflammatory bowel disease'. Neuroimmunomodulation, 4 (2):70-76 [Details]
	(1997)	'Addison disease in patients treated with glucocorticoid therapy' Cronin, C. C.,Callaghan, N.,Kearney, P. J.,Murnaghan, D. J.,Shanahan, F. (1997) 'Addison disease in patients treated with glucocorticoid therapy'. Arch Intern Med, 157 (44):456-458456   [Details]
	(1997)	'Micrometastases: marker of metastatic potential or evidence of residual disease?' O'Sullivan, G. C.,Collins, J. K.,Kelly, J.,Morgan, J.,Madden, M.,Shanahan, F. (1997) 'Micrometastases: marker of metastatic potential or evidence of residual disease?'. Gut, 40 (44):512-5 [Details]
	(1997)	'Designer drugs for inflammatory bowel disease' Shanahan, F. (1997) 'Designer drugs for inflammatory bowel disease'. Gastroenterology, 112 (66):2153-4 [Details]
	(1997)	'Antibody 'markers' in Crohn's disease: opportunity or overstatement?' Shanahan, F. (1997) 'Antibody 'markers' in Crohn's disease: opportunity or overstatement?'. Gut, 40 (44):557-8 [Details]
	(1997)	'A gut reaction: lymphoepithelial communication in the intestine' Shanahan, F. (1997) 'A gut reaction: lymphoepithelial communication in the intestine'. Science, 275 (53085308):1897-8 [Details]
	(1997)	'Confirmation of the Fas counterattack in host-tumor relations' Shanahan, F.,O'Connell, J.,O'Sullivan, G. C. (1997) 'Confirmation of the Fas counterattack in host-tumor relations'. Gastroenterology, 113 (55):1804-6 [Details]
	(1997)	'Appendectomy, mucosal immunity, and colitis' Shanahan, F.,O'Sullivan, G. C. (1997) 'Appendectomy, mucosal immunity, and colitis'. Gastroenterology, 112 (55):1766-7 [Details]
	(1997)	'Progress in treating esophageal adenocarcinoma' Shanahan, F.,O'Sullivan, G. C. (1997) 'Progress in treating esophageal adenocarcinoma'. Gastroenterology, 112 (44):1417-8 [Details]
	(1997)	'Histological patchiness and sparing of the rectum in ulcerative colitis: refuting the dogma' Bernstein, C. N.,Shanahan, F.,Weinstein, W. M. (1997) 'Histological patchiness and sparing of the rectum in ulcerative colitis: refuting the dogma'. J Clin Pathol, 50 (44):354-5 [Details]
	(1997)	'High prevalence of celiac disease among patients with insulin-dependent (type I) diabetes mellitus' Cronin, C. C.,Feighery, A.,Ferriss, J. B.,Liddy, C.,Shanahan, F.,Feighery, C. (1997) 'High prevalence of celiac disease among patients with insulin-dependent (type I) diabetes mellitus'. American Journal of Gastroenterology, 92 (12):2210-2212 [Details]
	(1997)	'Quantification of the placebo response in ulcerative colitis' Ilnyckyj, A.,Shanahan, F.,Anton, P. A.,Cheang, M.,Bernstein, C. N. (1997) 'Quantification of the placebo response in ulcerative colitis'. Gastroenterology, 112 (6):1854-1858 [Details]
	(1997)	'Thrombosis in inflammatory bowel disease: clinical setting, procoagulant profile and factor V Leiden' Jackson, L. M.,O'Gorman, P. J.,O'Connell, J.,Cronin, C. C.,Cotter, K. P.,Shanahan, F. (1997) 'Thrombosis in inflammatory bowel disease: clinical setting, procoagulant profile and factor V Leiden'. Qjm, 90 (33):183-8 [Details]
	(1997)	'Insulin-dependent diabetes mellitus and coeliac disease' Cronin, C. C.,Shanahan, F. (1997) 'Insulin-dependent diabetes mellitus and coeliac disease'. Lancet, 349 (90589058):1096-10971096   [Details]
	(1997)	'The Fas counterattack: a molecular mechanism of tumor immune privilege' O'Connell, J.,Bennett, M. W.,O'Sullivan, G. C.,Collins, J. K.,Shanahan, F. (1997) 'The Fas counterattack: a molecular mechanism of tumor immune privilege'. Mol Med, 3 (55):294-300 [Details]
	(1996)	'The Fas counterattack: Fas-mediated T cell killing by colon cancer cells expressing Fas ligand' O'Connell, J.,O'Sullivan, G. C.,Collins, J. K.,Shanahan, F. (1996) 'The Fas counterattack: Fas-mediated T cell killing by colon cancer cells expressing Fas ligand'. J Exp Med, 184 (33):1075-82 [Details]
	(1996)	'MALTectomy (appendectomy/tonsillectomy) does not influence the occurrence or mode of presentation of adult celiac disease' O'Gorman, P.,Bennett, D.,Kavanagh, E.,Twohig, L. B.,O'Sullivan, G. C.,O'Regan, P.,Shanahan, F. (1996) 'MALTectomy (appendectomy/tonsillectomy) does not influence the occurrence or mode of presentation of adult celiac disease'. Am J Gastroenterol, 91 (44):723-5 [Details]
	(1996)	'Regional immunosuppression in esophageal squamous cancer: evidence from functional studies with matched lymph nodes' O'Sullivan, G. C.,Corbett, A. R.,Shanahan, F.,Collins, J. K. (1996) 'Regional immunosuppression in esophageal squamous cancer: evidence from functional studies with matched lymph nodes'. J Immunol, 157 (1010):4717-20 [Details]
	(1996)	'Closing in on the genetics of Crohn's disease' Shanahan, F. (1996) 'Closing in on the genetics of Crohn's disease'. Gastroenterology, 111 (55):1390-1 [Details]
	(1996)	'Cyclin C/CDK8 is a novel CTD kinase associated with RNA polymerase II' Rickert, P.,Seghezzi, W.,Shanahan, F.,Cho, H.,Lees, E. (1996) 'Cyclin C/CDK8 is a novel CTD kinase associated with RNA polymerase II'. Oncogene, 12 (1212):2631-26402631   [Details]
	(1996)	'A randomized, placebo-controlled trial of calcium supplementation for decreased bone density in corticosteroid-using patients with inflammatory bowel disease: a pilot study' Bernstein, C. N.,Seeger, L. L.,Anton, P. A.,Artinian, L.,Geffrey, S.,Goodman, W.,Belin, T. R.,Shanahan, F. (1996) 'A randomized, placebo-controlled trial of calcium supplementation for decreased bone density in corticosteroid-using patients with inflammatory bowel disease: a pilot study'. Aliment Pharmacol Ther, 10 (55):777-86 [Details]
	(1996)	'Purine analogues and Crohn's disease: learning more about the long-term' Bernstein, C. N.,Shanahan, F. (1996) 'Purine analogues and Crohn's disease: learning more about the long-term'. Gastroenterology, 111 (66):1774-6 [Details]
	(1996)	'Appropriateness of laboratory tests: requests for atypical pneumonia serology in a teaching hospital' Jackson, L. M.,Shanahan, F.,Cryan, B.,Bredin, C. P.,Cronin, C. C. (1996) 'Appropriateness of laboratory tests: requests for atypical pneumonia serology in a teaching hospital'. Ir J Med Sci, 165 (22):93-4 [Details]
	(1996)	'Critical appraisal of enteral nutrition as primary therapy in adults with Crohn's disease' Bernstein, C. N.,Shanahan, F. (1996) 'Critical appraisal of enteral nutrition as primary therapy in adults with Crohn's disease'. 91 (1010):2075-20792075   [Details]
	(1996)	'Cadherins, inflammatory bowel disease, and neoplasia' Shanahan, F. (1996) 'Cadherins, inflammatory bowel disease, and neoplasia'. Gastroenterology, 111 (11):261-2 [Details]
	(1995)	'Psychoneuroimmunology and suicidal behaviour' Kelleher, M.,Shanahan, F. (1995) 'Psychoneuroimmunology and suicidal behaviour'. Ir Med J, 88 (11) [Details]
	(1995)	'Non-linkage of a T-cell receptor gamma chain microsatellite (D7S485) to rheumatoid arthritis in multiplex families' McDermott, M.,Hsu, C.,Molloy, M. G.,Mulcahy, B.,Phelan, M.,Shanahan, F.,O'Gara, F.,Adams, C.,Rubin, L. A.,Clegg, D. O.,et al., (1995) 'Non-linkage of a T-cell receptor gamma chain microsatellite (D7S485) to rheumatoid arthritis in multiplex families'. J Autoimmun, 8 (11):131-8 [Details]
	(1995)	'A prospective comparison of laparoscopy and imaging in the staging of esophagogastric cancer before surgery' O'Brien, M. G.,Fitzgerald, E. F.,Lee, G.,Crowley, M.,Shanahan, F.,O'Sullivan, G. C. (1995) 'A prospective comparison of laparoscopy and imaging in the staging of esophagogastric cancer before surgery'. Am J Gastroenterol, 90 (1212):2191-4 [Details]
	(1995)	'Crohn's disease: to lump or to split?' Shanahan, F. (1995) 'Crohn's disease: to lump or to split?'. Gastroenterology, 109 (66):2045-6 [Details]
	(1995)	'From basic advances to therapeutic strategies in ulcerative colitis' Shanahan, F. (1995) 'From basic advances to therapeutic strategies in ulcerative colitis'. Qjm, 88 (99):599-602 [Details]
	(1995)	'Sarcoidosis, the pancreas, and diabetes mellitus' Cronin, C. C.,Dinneen, S. F.,Mitchell, T. H.,Shanahan, F. L. (1995) 'Sarcoidosis, the pancreas, and diabetes mellitus'. Am J Gastroenterol, 90 (1111) [Details]
	(1995)	'Stem cell factor and intestinal lymphoepithelial communication' Shanahan, F.,O'Sullivan, G. C. (1995) 'Stem cell factor and intestinal lymphoepithelial communication'. Gastroenterology, 109 (44):1397-8 [Details]
	(1995)	'Angiostatin: candidate for molecule of the year!' Shanahan, F.,O'Sullivan, G. C. (1995) 'Angiostatin: candidate for molecule of the year!'. Gastroenterology, 108 (66):1946-8 [Details]
	(1995)	'Decreased bone density in inflammatory bowel disease is related to corticosteroid use and not disease diagnosis' Bernstein, C. N.,Seeger, L. L.,Sayre, J. W.,Anton, P. A.,Artinian, L.,Shanahan, F. (1995) 'Decreased bone density in inflammatory bowel disease is related to corticosteroid use and not disease diagnosis'. J Bone Miner Res, 10 (22):250-6 [Details]
	(1995)	'Cyclosporine and inflammatory bowel disease: still more questions' Bernstein, C. N.,Shanahan, F. (1995) 'Cyclosporine and inflammatory bowel disease: still more questions'. Gastroenterology, 108 (33):943-5 [Details]
	(1995)	'Patchiness of mucosal inflammation in treated ulcerative colitis: a prospective study' Bernstein, C. N.,Shanahan, F.,Anton, P. A.,Weinstein, W. M. (1995) 'Patchiness of mucosal inflammation in treated ulcerative colitis: a prospective study'. Gastrointest Endosc, 42 (33):232-7 [Details]
	(1995)	'Physicians' perceptions of dysplasia and approaches to surveillance colonoscopy in ulcerative colitis' Bernstein, C. N.,Weinstein, W. M.,Levine, D. S.,Shanahan, F. (1995) 'Physicians' perceptions of dysplasia and approaches to surveillance colonoscopy in ulcerative colitis'. Am J Gastroenterol, 90 (1212):2106-14 [Details]
	(1995)	'Discontent with dysplasia surveillance in ulcerative colitis' Shanahan, F. (1995) 'Discontent with dysplasia surveillance in ulcerative colitis'. Inflamm Bowel Dis, 1 (11):80-3 [Details]
	(1994)	'Current concepts of the pathogenesis of inflammatory bowel disease' Shanahan, F. (1994) 'Current concepts of the pathogenesis of inflammatory bowel disease'. Ir J Med Sci, 163 (1212):544-9 [Details]
	(1994)	'Neutrophil autoantibodies in inflammatory bowel disease: are they important?' Shanahan, F. (1994) 'Neutrophil autoantibodies in inflammatory bowel disease: are they important?'. Gastroenterology, 107 (22):586-9 [Details]
	(1994)	'Safety of low-dose purine analogues in inflammatory bowel disease' Shanahan, F.,Bernstein, C. N. (1994) 'Safety of low-dose purine analogues in inflammatory bowel disease'. Gastroenterology, 107 (66):1905-6 [Details]
	(1994)	'Reduced signal transduction through glucocorticoid receptor in Burkitt's lymphoma cell lines' Sinclair, A. J.,Jacquemin, M. G.,Brooks, L.,Shanahan, F.,Brimmell, M.,Rowe, M.,Farrell, P. J. (1994) 'Reduced signal transduction through glucocorticoid receptor in Burkitt's lymphoma cell lines'. Virology, 199 (22):339-53 [Details]
	(1994)	'A mechanism for esophageal tumor-derived immunosuppression' Shanahan, F. (1994) 'A mechanism for esophageal tumor-derived immunosuppression'. Gastroenterology, 106 (66):1717-8 [Details]
	(1994)	'Low-dose 6-mercaptopurine in inflammatory bowel disease is associated with minimal hematologic toxicity' Bernstein, C. N.,Artinian, L.,Anton, P. A.,Shanahan, F. (1994) 'Low-dose 6-mercaptopurine in inflammatory bowel disease is associated with minimal hematologic toxicity'. Dig Dis Sci, 39 (88):1638-41 [Details]
	(1994)	'Epstein-Barr virus SM protein' Cook, I. D.,Shanahan, F.,Farrell, P. J. (1994) 'Epstein-Barr virus SM protein'. Virology, 205 (11):217-27 [Details]
	(1994)	'Are we telling patients the truth about surveillance colonoscopy in ulcerative colitis?' Bernstein, C. N.,Shanahan, F.,Weinstein, W. M. (1994) 'Are we telling patients the truth about surveillance colonoscopy in ulcerative colitis?'. Lancet, 343 (88898889):71-4 [Details]
	(1994)	'Neurotransmitters and cytokines in CNS pathology' Mitrovic, B.,Martin, F. C.,Charles, A. C.,Ignarro, L. J.,Anton, P. A.,Shanahan, F.,Merrill, J. E. (1994) 'Neurotransmitters and cytokines in CNS pathology'. Prog Brain Res, 103 :319-30 [Details]
	(1994)	'Milk tolerance in adults with ulcerative colitis' Bernstein, C. N.,Ament, M.,Artinian, L.,Ridgeway, J.,Shanahan, F. (1994) 'Milk tolerance in adults with ulcerative colitis'. Am J Gastroenterol, 89 (66):872-7 [Details]
	(1993)	'Distinct associations of HLA class II genes with inflammatory bowel disease' Toyoda, H.,Wang, S. J.,Yang, H. Y.,Redford, A.,Magalong, D.,Tyan, D.,McElree, C. K.,Pressman, S. R.,Shanahan, F.,Targan, S. R.,et al., (1993) 'Distinct associations of HLA class II genes with inflammatory bowel disease'. Gastroenterology, 104 (33):741-8 [Details]
	(1993)	'Familial empirical risks for inflammatory bowel disease: differences between Jews and non-Jews' Yang, H.,McElree, C.,Roth, M. P.,Shanahan, F.,Targan, S. R.,Rotter, J. I. (1993) 'Familial empirical risks for inflammatory bowel disease: differences between Jews and non-Jews'. Gut, 34 (44):517-24 [Details]
	(1993)	'VIP modulates intracellular calcium oscillations in human lymphoblasts' Anton, P. A.,Shanahan, F.,Sun, X. P.,Diehl, D.,Kodner, A.,Mayer, E. A. (1993) 'VIP modulates intracellular calcium oscillations in human lymphoblasts'. Immunopharmacol Immunotoxicol, 15 (44):429-46 [Details]
	(1993)	'Pneumocystis carinii pneumonia in patients with ulcerative colitis treated with corticosteroids' Bernstein, C. N.,Kolodny, M.,Block, E.,Shanahan, F. (1993) 'Pneumocystis carinii pneumonia in patients with ulcerative colitis treated with corticosteroids'. Am J Gastroenterol, 88 (44):574-7 [Details]
	(1993)	'Factor XIII: is it a factor in Crohn's disease?' Bernstein, C. N.,Shanahan, F. (1993) 'Factor XIII: is it a factor in Crohn's disease?'. Gastroenterology, 105 (22):605-7 [Details]
	(1993)	'Purine analogues and ulcerative colitis' Bernstein, C. N.,Shanahan, F. (1993) 'Purine analogues and ulcerative colitis'. Gastroenterology, 104 (11):325-6 [Details]
	(1993)	'Successful combined liver and small intestine transplantation for short-gut syndrome and liver failure' Busuttil, R. W.,Farmer, D. G.,Shaked, A.,Rolandelli, R.,Colonna, J. O., 2nd,Jurim, O.,Colquhoun, S. D.,Bernstein, C.,Shanahan, F.,Robert, M.,et al., (1993) 'Successful combined liver and small intestine transplantation for short-gut syndrome and liver failure'. West J Med, 158 (22):184-8 [Details]
	(1993)	'Production of interleukin-1 by microglia in response to substance P: role for a non-classical NK-1 receptor' Martin, F. C.,Anton, P. A.,Gornbein, J. A.,Shanahan, F.,Merrill, J. E. (1993) 'Production of interleukin-1 by microglia in response to substance P: role for a non-classical NK-1 receptor'. J Neuroimmunol, 42 (11):53-60 [Details]
	(1993)	'Pathogenesis of ulcerative colitis' Shanahan, F. (1993) 'Pathogenesis of ulcerative colitis'. Lancet, 342 (88688868):407-11 [Details]
	(1993)	'Food allergy: fact, fiction, and fatality' Shanahan, F. (1993) 'Food allergy: fact, fiction, and fatality'. Gastroenterology, 104 (44):1229-31 [Details]
	(1993)	'A potential role for the immune system in gastric acid secretion and peptic ulcer disease' Shanahan, F.,Anton, P. A. (1993) 'A potential role for the immune system in gastric acid secretion and peptic ulcer disease'. Gastroenterology, 104 (66):1874-6 [Details]
	(1993)	'ANCAs aweigh in colitis' Shanahan, F.,Bernstein, C. N. (1993) 'ANCAs aweigh in colitis'. Gastroenterology, 105 (33):946-7 [Details]
	(1993)	'Odd forms of inflammatory bowel disease: what can they tell us?' Shanahan, F.,Bernstein, C. N. (1993) 'Odd forms of inflammatory bowel disease: what can they tell us?'. Gastroenterology, 104 (11):327-9 [Details]
	(1992)	'Metronidazole in Crohn's disease: what's the score?' Bernstein, C. N.,Shanahan, F. (1992) 'Metronidazole in Crohn's disease: what's the score?'. Gastroenterology, 102 (4 Pt 14 Pt 1):1435-6 [Details]
	(1992)	'Interleukin 8, neutrophils, and acute inflammation' Shanahan, F.,Bernstein, C. N. (1992) 'Interleukin 8, neutrophils, and acute inflammation'. Gastroenterology, 103 (11):341-3 [Details]
	(1992)	'Neutrophil autoantibodies in ulcerative colitis: familial aggregation and genetic heterogeneity' Shanahan, F.,Duerr, R. H.,Rotter, J. I.,Yang, H.,Sutherland, L. R.,McElree, C.,Landers, C. J.,Targan, S. R. (1992) 'Neutrophil autoantibodies in ulcerative colitis: familial aggregation and genetic heterogeneity'. Gastroenterology, 103 (22):456-61 [Details]
	(1992)	'Braving the elementals in Crohn's disease' Bernstein, C. N.,Shanahan, F. (1992) 'Braving the elementals in Crohn's disease'. Gastroenterology, 103 (44):1363-4 [Details]
	(1992)	'Ulcerative colitis-linked antineutrophil cytoplasmic antibody in the cotton-top tamarin model of colitis' Targan, S. R.,Landers, C. J.,King, N. W.,Podolsky, D. J.,Shanahan, F. (1992) 'Ulcerative colitis-linked antineutrophil cytoplasmic antibody in the cotton-top tamarin model of colitis'. Gastroenterology, 102 (55):1493-8 [Details]
	(1992)	'Medical treatment of inflammatory bowel disease' Shanahan, F.,Targan, S. (1992) 'Medical treatment of inflammatory bowel disease'. Annu Rev Med, 43 :125-33 [Details]
	(1991)	'Development of a biotinylated analog of substance P for use as a receptor probe' Anton, P. A.,Reeve, J. R., Jr.,Vidrich, A.,Mayer, E.,Shanahan, F. (1991) 'Development of a biotinylated analog of substance P for use as a receptor probe'. Lab Invest, 64 (55):703-8 [Details]
	(1991)	'Biotinylation of a bombesin/gastrin-releasing peptide analogue for use as a receptor probe' Anton, P. A.,Reeve, J. R., Jr.,Rivier, J. E.,Vidrich, A.,Schepp, W.,Shanahan, F. (1991) 'Biotinylation of a bombesin/gastrin-releasing peptide analogue for use as a receptor probe'. Peptides, 12 (22):375-81 [Details]
	(1991)	'Differentiation-associated expression of the Epstein-Barr virus BZLF1 transactivator protein in oral hairy leukoplakia' Young, L. S.,Lau, R.,Rowe, M.,Niedobitek, G.,Packham, G.,Shanahan, F.,Rowe, D. T.,Greenspan, D.,Greenspan, J. S.,Rickinson, A. B.,et al., (1991) 'Differentiation-associated expression of the Epstein-Barr virus BZLF1 transactivator protein in oral hairy leukoplakia'. J Virol, 65 (66):2868-74 [Details]
	(1991)	'Role of mucosal T-cell-generated cytokines in epithelial cell injury' Targan, S. R.,Deem, R. L.,Shanahan, F. (1991) 'Role of mucosal T-cell-generated cytokines in epithelial cell injury'. Immunol Res, 10 (3-43-4):472-8 [Details]
	(1991)	'Oral mesalamine (Asacol) for mildly to moderately active ulcerative colitis. A multicenter study' Sninsky, C. A.,Cort, D. H.,Shanahan, F.,Powers, B. J.,Sessions, J. T.,Pruitt, R. E.,Jacobs, W. H.,Lo, S. K.,Targan, S. R.,Cerda, J. J.,et al., (1991) 'Oral mesalamine (Asacol) for mildly to moderately active ulcerative colitis. A multicenter study'. Ann Intern Med, 115 (55):350-5 [Details]
	(1991)	'Pathways of activation of the Epstein-Barr virus productive cycle' Sinclair, A. J.,Brimmell, M.,Shanahan, F.,Farrell, P. J. (1991) 'Pathways of activation of the Epstein-Barr virus productive cycle'. J Virol, 65 (55):2237-44 [Details]
	(1991)	'Colonoscopy during an attack of severe ulcerative colitis' Shanahan, F.,Targan, S.,Anton, P.,Duerr, R. (1991) 'Colonoscopy during an attack of severe ulcerative colitis'. Am J Gastroenterol, 86 (99) [Details]
	(1991)	'Neutrophil autoantibodies as disease markers for ulcerative colitis' Shanahan, F.,Landers, C.,Duerr, R.,Targan, S. R. (1991) 'Neutrophil autoantibodies as disease markers for ulcerative colitis'. Immunol Res, 10 (3-43-4):479-84 [Details]
	(1991)	'Prevalence and severity of periodontal disease in patients with inflammatory bowel disease' Flemmig, T. F.,Shanahan, F.,Miyasaki, K. T. (1991) 'Prevalence and severity of periodontal disease in patients with inflammatory bowel disease'. J Clin Periodontol, 18 (99):690-7 [Details]
	(1991)	'p53 is frequently mutated in Burkitt's lymphoma cell lines' Farrell, P. J.,Allan, G. J.,Shanahan, F.,Vousden, K. H.,Crook, T. (1991) 'p53 is frequently mutated in Burkitt's lymphoma cell lines'. Embo j, 10 (1010):2879-87 [Details]
	(1991)	'Anti-neutrophil cytoplasmic antibodies in ulcerative colitis. Comparison with other colitides/diarrheal illnesses' Duerr, R. H.,Targan, S. R.,Landers, C. J.,Sutherland, L. R.,Shanahan, F. (1991) 'Anti-neutrophil cytoplasmic antibodies in ulcerative colitis. Comparison with other colitides/diarrheal illnesses'. Gastroenterology, 100 (66):1590-6 [Details]
	(1991)	'Triggered human mucosal T cells release tumour necrosis factor-alpha and interferon-gamma which kill human colonic epithelial cells' Deem, R. L.,Shanahan, F.,Targan, S. R. (1991) 'Triggered human mucosal T cells release tumour necrosis factor-alpha and interferon-gamma which kill human colonic epithelial cells'. Clin Exp Immunol, 83 (11):79-84 [Details]
	(1991)	'Isolation and characterization of a cDNA clone corresponding to the mouse t-complex gene Tcp-1x' Dudley, K.,Shanahan, F.,Burtenshaw, M.,Evans, E. P.,Ruddy, S.,Lyon, M. F. (1991) 'Isolation and characterization of a cDNA clone corresponding to the mouse t-complex gene Tcp-1x'. Genet Res, 57 (22):147-52 [Details]
	(1991)	'Neutrophil cytoplasmic antibodies: a link between primary sclerosing cholangitis and ulcerative colitis' Duerr, R. H.,Targan, S. R.,Landers, C. J.,LaRusso, N. F.,Lindsay, K. L.,Wiesner, R. H.,Shanahan, F. (1991) 'Neutrophil cytoplasmic antibodies: a link between primary sclerosing cholangitis and ulcerative colitis'. Gastroenterology, 100 (5 Pt 15 Pt 1):1385-91 [Details]
	(1990)	'The CD8+ Leu-7+ subset of T cells in Crohn's disease: distinction between cytotoxic and covert suppressor functions' Deem, R. L.,Targan, S. R.,Niederlehner, A.,Shanahan, F. (1990) 'The CD8+ Leu-7+ subset of T cells in Crohn's disease: distinction between cytotoxic and covert suppressor functions'. Clin Exp Immunol, 80 (33):387-94 [Details]
	(1990)	'A distinct subset of antineutrophil cytoplasmic antibodies is associated with inflammatory bowel disease' Saxon, A.,Shanahan, F.,Landers, C.,Ganz, T.,Targan, S. (1990) 'A distinct subset of antineutrophil cytoplasmic antibodies is associated with inflammatory bowel disease'. J Allergy Clin Immunol, 86 (22):202-10 [Details]
	(1990)	'Sulfasalazine inhibits the binding of TNF alpha to its receptor' Shanahan, F.,Niederlehner, A.,Carramanzana, N.,Anton, P. (1990) 'Sulfasalazine inhibits the binding of TNF alpha to its receptor'. Immunopharmacology, 20 (33):217-24 [Details]
	(1990)	'Albinism and Hermansky-Pudlak syndrome in Puerto Rico' Witkop, C. J.,Nunez Babcock, M.,Rao, G. H.,Gaudier, F.,Summers, C. G.,Shanahan, F.,Harmon, K. R.,Townsend, D.,Sedano, H. O.,King, R. A.,et al., (1990) 'Albinism and Hermansky-Pudlak syndrome in Puerto Rico'. Bol Asoc Med P R, 82 (88):333-9 [Details]
	(1989)	'Enhanced peripheral blood T-cell cytotoxicity in inflammatory bowel disease' Shanahan, F.,Leman, B.,Deem, R.,Niederlehner, A.,Brogan, M.,Targan, S. (1989) 'Enhanced peripheral blood T-cell cytotoxicity in inflammatory bowel disease'. J Clin Immunol, 9 (11):55-64 [Details]
	(1989)	'Temporal expression and location of colony-stimulating factor 1 (CSF-1) and its receptor in the female reproductive tract are consistent with CSF-1-regulated placental development' Arceci, R. J.,Shanahan, F.,Stanley, E. R.,Pollard, J. W. (1989) 'Temporal expression and location of colony-stimulating factor 1 (CSF-1) and its receptor in the female reproductive tract are consistent with CSF-1-regulated placental development'. Proc Natl Acad Sci U S A, 86 (2222):8818-22 [Details]
	(1989)	'Increased neutrophil receptors for and response to the proinflammatory bacterial peptide formyl-methionyl-leucyl-phenylalanine in Crohn's disease' Anton, P. A.,Targan, S. R.,Shanahan, F. (1989) 'Increased neutrophil receptors for and response to the proinflammatory bacterial peptide formyl-methionyl-leucyl-phenylalanine in Crohn's disease'. Gastroenterology, 97 (11):20-8 [Details]
	(1989)	'Lack of an association between polymorphisms of the T-cell receptor alpha-chain and ulcerative colitis' Randolph, L. M.,Toyoda, H.,McElree, C. K.,Shanahan, F.,Targan, S. R.,Rotter, J. I. (1989) 'Lack of an association between polymorphisms of the T-cell receptor alpha-chain and ulcerative colitis'. Gastroenterology, 97 (55):1115-20 [Details]
	(1988)	'Human mucosal T-cell cytotoxicity' Shanahan, F.,Deem, R.,Nayersina, R.,Leman, B.,Targan, S. (1988) 'Human mucosal T-cell cytotoxicity'. Gastroenterology, 94 (44):960-7 [Details]
	(1988)	'Extending the scope in celiac disease' Shanahan, F.,Weinstein, W. M. (1988) 'Extending the scope in celiac disease'. N Engl J Med, 319 (1212):782-3 [Details]
	(1988)	'Neuroendocrine modulation of the immune system. Possible implications for inflammatory bowel disease' Shanahan, F.,Anton, P. (1988) 'Neuroendocrine modulation of the immune system. Possible implications for inflammatory bowel disease'. Dig Dis Sci, 33 (3 Suppl3 Suppl) [Details]
	(1988)	'Hidradenitis suppurativa. Glucose tolerance, clinical, microbiologic, and immunologic features and HLA frequencies in 27 patients' O'Loughlin, S.,Woods, R.,Kirke, P. N.,Shanahan, F.,Byrne, A.,Drury, M. I. (1988) 'Hidradenitis suppurativa. Glucose tolerance, clinical, microbiologic, and immunologic features and HLA frequencies in 27 patients'. Arch Dermatol, 124 (77):1043-6 [Details]
	(1988)	'Role of the CD45 (T-200) molecule in anti-CD3-triggered T cell-mediated cytotoxicity' Deem, R. L.,Shanahan, F.,Niederlehner, A.,Targan, S. R. (1988) 'Role of the CD45 (T-200) molecule in anti-CD3-triggered T cell-mediated cytotoxicity'. Cell Immunol, 117 (11):99-110 [Details]
	(1988)	'Enhanced neutrophil chemiluminescence in familial Mediterranean fever' Anton, P. A.,Targan, S. R.,Vigna, S. R.,Durham, M.,Schwabe, A. D.,Shanahan, F. (1988) 'Enhanced neutrophil chemiluminescence in familial Mediterranean fever'. J Clin Immunol, 8 (22):148-56 [Details]
	(1988)	'Modulation of histamine release from canine fundic mucosal mast cells' Soll, A. H.,Toomey, M.,Culp, D.,Shanahan, F.,Beaven, M. A. (1988) 'Modulation of histamine release from canine fundic mucosal mast cells'. Am J Physiol, 254 (1 Pt 11 Pt 1) [Details]
	(1988)	'Hermansky-Pudlak syndrome: an immunologic assessment of 15 cases' Shanahan, F.,Randolph, L.,King, R.,Oseas, R.,Brogan, M.,Witkop, C.,Rotter, J.,Targan, S. (1988) 'Hermansky-Pudlak syndrome: an immunologic assessment of 15 cases'. Am J Med, 85 (66):823-8 [Details]
	(1987)	'Cytotoxic lymphocytes in human intestinal mucosa' Shanahan, F.,Brogan, M.,Nayersina, R.,Targan, S. (1987) 'Cytotoxic lymphocytes in human intestinal mucosa'. Adv Exp Med Biol, 216a :457-63 [Details]
	(1987)	'Defective memory B cell formation in patients with inflammatory bowel disease following tetanus toxoid booster immunization' Brogan, M. D.,Shanahan, F.,Oliver, M.,Stevens, R. H.,Targan, S. R. (1987) 'Defective memory B cell formation in patients with inflammatory bowel disease following tetanus toxoid booster immunization'. J Clin Lab Immunol, 24 (22):69-74 [Details]
	(1987)	'Human mucosal cytotoxic effector cells' Shanahan, F.,Brogan, M.,Targan, S. (1987) 'Human mucosal cytotoxic effector cells'. Gastroenterology, 92 (66):1951-7 [Details]
	(1987)	'Modulation of ongoing human immunoglobulin synthesis by natural killer cells' Kimata, H.,Shanahan, F.,Brogan, M.,Targan, S.,Saxon, A. (1987) 'Modulation of ongoing human immunoglobulin synthesis by natural killer cells'. Cell Immunol, 107 (11):74-88 [Details]
	(1987)	'Immunologic mechanisms in intestinal diseases' Targan, S. R.,Kagnoff, M. F.,Brogan, M. D.,Shanahan, F. (1987) 'Immunologic mechanisms in intestinal diseases'. Ann Intern Med, 106 (66):853-70 [Details]
	(1987)	'Sulfasalazine and salicylate-induced exacerbation of ulcerative colitis' Shanahan, F.,Targan, S. (1987) 'Sulfasalazine and salicylate-induced exacerbation of ulcerative colitis'. N Engl J Med, 317 (77) [Details]
	(1987)	'Human lung mast cells: distribution and abundance of histochemically distinct subpopulations' Shanahan, F.,MacNiven, I.,Dyck, N.,Denburg, J. A.,Bienenstock, J.,Befus, A. D. (1987) 'Human lung mast cells: distribution and abundance of histochemically distinct subpopulations'. Int Arch Allergy Appl Immunol, 83 (33):329-31 [Details]
	(1986)	'Mast cell heterogeneity: effect of anti-allergic compounds on neuropeptide-induced histamine release' Shanahan, F.,Lee, T. D.,Bienenstock, J.,Befus, A. D. (1986) 'Mast cell heterogeneity: effect of anti-allergic compounds on neuropeptide-induced histamine release'. Int Arch Allergy Appl Immunol, 80 (44):424-6 [Details]
	(1986)	'Inhibition of cytotoxicity by sulfasalazine. II. Sulfasalazine and sulfapyridine inhibit different stages of the NK and NKCF lytic processes' Shanahan, F.,Niederlehner, A.,MacDermott, R. P.,Stenson, W. F.,Kane, M. G.,Targan, S. (1986) 'Inhibition of cytotoxicity by sulfasalazine. II. Sulfasalazine and sulfapyridine inhibit different stages of the NK and NKCF lytic processes'. Immunopharmacology, 11 (22):111-8 [Details]
	(1986)	'Functional characterization of mast cells generated in vitro from the mesenteric lymph node of rats infected with Nippostrongylus brasiliensis' Shanahan, F.,Lee, T. D.,Denburg, J. A.,Bienenstock, J.,Befus, A. D. (1986) 'Functional characterization of mast cells generated in vitro from the mesenteric lymph node of rats infected with Nippostrongylus brasiliensis'. Immunology, 57 (33):455-9 [Details]
	(1986)	'K562 killing by K, IL 2-responsive NK, and T cells involves different effector cell post-binding trigger mechanisms' Shanahan, F.,Brogan, M. D.,Newman, W.,Targan, S. R. (1986) 'K562 killing by K, IL 2-responsive NK, and T cells involves different effector cell post-binding trigger mechanisms'. J Immunol, 137 (22):723-6 [Details]
	(1985)	'Mast cell heterogeneity: effects of neuroenteric peptides on histamine release' Shanahan, F.,Denburg, J. A.,Fox, J.,Bienenstock, J.,Befus, D. (1985) 'Mast cell heterogeneity: effects of neuroenteric peptides on histamine release'. J Immunol, 135 (22):1331-7 [Details]
	(1985)	'The pancreas, primary biliary cirrhosis and the dry gland syndrome' Shanahan, F.,Stack, J.,Maguire, S.,Crowe, J. (1985) 'The pancreas, primary biliary cirrhosis and the dry gland syndrome'. Ir J Med Sci, 154 (1010):387-9 [Details]
	(1985)	'Intestinal mucosal mast cells: isolation from rat lamina propria and purification using unit gravity velocity sedimentation' Lee, T. D.,Shanahan, F.,Miller, H. R.,Bienenstock, J.,Befus, A. D. (1985) 'Intestinal mucosal mast cells: isolation from rat lamina propria and purification using unit gravity velocity sedimentation'. Immunology, 55 (44):721-8 [Details]
	(1985)	'Comparative aspects of mast cell heterogeneity in different species and sites' Bienenstock, J.,Befus, D.,Denburg, J.,Goto, T.,Lee, T.,Otsuka, H.,Shanahan, F. (1985) 'Comparative aspects of mast cell heterogeneity in different species and sites'. Int Arch Allergy Appl Immunol, 77 (1-21-2):126-9 [Details]
	(1985)	'Indium-111 leukocyte imaging in colitis induced by Clostridium difficile' Asbill, M. C.,Shanahan, F.,Van Deventer, G. M. (1985) 'Indium-111 leukocyte imaging in colitis induced by Clostridium difficile'. J Nucl Med, 26 (33):315-6 [Details]
	(1984)	'The influence of endorphins on peritoneal and mucosal mast cell secretion' Shanahan, F.,Lee, T. D.,Bienenstock, J.,Befus, A. D. (1984) 'The influence of endorphins on peritoneal and mucosal mast cell secretion'. Journal of Allergy and Clinical Immunology, 74 (4 Pt 1):499-504 [Details]
	(1984)	'Mast cell heterogeneity' Shanahan, F.,Denburg, J. A.,Bienenstock, J.,Befus, A. D. (1984) 'Mast cell heterogeneity'. Canadian Journal of Physiology and Pharmacology, 62 (6):734-737 [Details]
	(1983)	'Factor V deficiency and its reversal with gluten restriction. In a patient with celiac disease' Shanahan, F.,Aburajab, A.,Goodacre, R.,Blajchman, M. A. (1983) 'Factor V deficiency and its reversal with gluten restriction. In a patient with celiac disease'. Arch Intern Medarch Intern Med, 143 (10):2009-2010 [Details]
	(1983)	'Primary Biliary Cirrhosis associated with Coeliac Disease' Shanahan, F.,O'Regan, P. F.,Crowe, J. P. (1983) 'Primary Biliary Cirrhosis associated with Coeliac Disease'. Irish Journal of Medical Science, 76 (6) [Details]
	(1983)	'Endoscopic sphincterotomy' O'Regan, P. F.,Shanahan, F.,Gallagher, C.,Crowe, J. P.,Lennon, J. R. (1983) 'Endoscopic sphincterotomy'. Irish Journal of Medical Science, 152 (10):373-376 [Details]
	(1983)	'Mast cell heterogeneity' Bienenstock, J.,Befus, A. D.,Denburg, J.,Goodacre, R.,Pearce, F.,Shanahan, F. (1983) 'Mast cell heterogeneity'. Monogr Allergymonogr Allergy, 18 :124-128 [Details]
	(1982)	'Successful endoscopic removal of a common bile duct foreign body' O'Regan, P. F.,Shanahan, F.,Lennon, J. R.,Crowe, J. (1982) 'Successful endoscopic removal of a common bile duct foreign body'. Endoscopy, 14 (11):26-27 [Details]
	(1982)	'Coeliac disease and diabetes mellitus: a study of 24 patients with HLA typing' Shanahan, F.,McKenna, R.,McCarthy, C. F.,Drury, M. I. (1982) 'Coeliac disease and diabetes mellitus: a study of 24 patients with HLA typing'. Quarterly Journal of Medicine, 51 (203):329-335 [Details]
	(1981)	'Cerebral intravascular coagulation complicating diabetic ketoacidosis' Shanahan, F.,Mortimer, G.,Drury, M. I. (1981) 'Cerebral intravascular coagulation complicating diabetic ketoacidosis'. Irish Journal of Medical Science, 150 (5):156-157 [Details]
	(1981)	'Hereditary angioedema--a cause of abdominal pain, often missed?' O'Regan, P. F.,Shanahan, F.,Barnes, L.,Lennon, J. R. (1981) 'Hereditary angioedema--a cause of abdominal pain, often missed?'. Irish Journal of Medical Science, 150 (11):335-337 [Details]
	(1981)	'Cimetidine and the control of pain in chronic relapsing pancreatitis' Shanahan, F.,Crowe, J. (1981) 'Cimetidine and the control of pain in chronic relapsing pancreatitis'. New England Journal of Medicine, 305 (11) [Details]
	(1981)	'Sonolucent biliary cast preventing endoscopic sphincterotomy' Shanahan, F.,Lennon, J.,Corrigan, T. (1981) 'Sonolucent biliary cast preventing endoscopic sphincterotomy'. Endoscopy, 13 (5) [Details]
	(1978)	'Atenolol self-poisoning' Shanahan, F. L.,Counihan, T. B. (1978) 'Atenolol self-poisoning'. British Medical Journal, 2 (6139) [Details]
	(1977)	'Mechanisms in autoimmune diseases' Shanahan, F.,McLaughlin, H. (1977) 'Mechanisms in autoimmune diseases'. Irish medical journal, 70 (16):472-479 [Details]

‍

Books

	Year	Publication
	(2011)	Clinical Dilemmas in Inflammatory Bowel Disease: New Challenges, 2nd Edition. Irving P, Siegel C, Rampton D, Shanahan F. (2011) Clinical Dilemmas in Inflammatory Bowel Disease: New Challenges, 2nd Edition. London: Blackwell Publishing Ltd. [Details]
	(2010)	Inflammatory Bowel Disease. Translating basic science into clinical practice. Targan S, Shanahan F, Karp LC. (2010) Inflammatory Bowel Disease. Translating basic science into clinical practice. London: Wiley-Blackwell. [Details]
	(2008)	3rd edition Inflammatory bowel disease: Fast Facts. Rampton D, Shanahan F. (2008) 3rd edition Inflammatory bowel disease: Fast Facts. London: Healthcare Press. [Details]
	(2007)	Pregnancy-related gastrointestinal & hepatological diseases and complications - Preface. Shanahan, Fergus (2007) Pregnancy-related gastrointestinal & hepatological diseases and complications - Preface. [Details]
	(2006)	Clinical dilemmas in IBD. Irving P, Rampton D, Shanahan F. (2006) Clinical dilemmas in IBD. London: Blackwell Scientific. [Details]
	(2006)	2nd Inflammatory bowel disease: Fast Facts. Rampton D, Shanahan F. (2006) 2nd Inflammatory bowel disease: Fast Facts. London: Healthcare Press. [Details]
	(2003)	Inflammatory Bowel Disease: From Bench to Bedside (2nd edition). Targan S, Shanahan F, Karp L. (2003) Inflammatory Bowel Disease: From Bench to Bedside (2nd edition). Dordrecht: Kluwer Academic. [Details]
	(2001)	Inflammatory bowel disease: Fast Facts. Rampton D, Shanahan F. (2001) Inflammatory bowel disease: Fast Facts. London: Healthcare Press. [Details]
	(1994)	Inflammatory Bowel Disease: From Bench to Bedside. Targan S and Shanahan F. (editors) (1994) Inflammatory Bowel Disease: From Bench to Bedside. Baltimore: Williams & Wilkins. [Details]
	(1990)	Immunology and Immunopathology of the Liver and Gastrointestinal Tract. Targan S and Shanahan F. (editors) (1990) Immunology and Immunopathology of the Liver and Gastrointestinal Tract. New York and Tokyo: Igaku-Shoin. [Details]

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Book Chapters

	Year	Publication
	(2014)	'What is the role of probiotics in my patients with inflammatory bowel disease?' Shanahan F (2014) 'What is the role of probiotics in my patients with inflammatory bowel disease?' In: Curbside Consultation in IBD: 49 Clinical Questions. USA: SLACK Inc. [Details]
	(2011)	'How do we minimise radiation exposure in IBD?' O’Connor OJ, Desmond A, Shanahan F, Maher MM. (2011) 'How do we minimise radiation exposure in IBD?' In: Clinical Dilemmas in Inflammatory Bowel Disease: New Challenges, Editors: Irving D, Shanahan F, Siegel C. USA: Blackwell Publishing. [Details]
	(2011)	'The luminal contents in IBD: what clinicians should know about the microbiota and its manipulation' Shanahan F (2011) 'The luminal contents in IBD: what clinicians should know about the microbiota and its manipulation' In: Advanced Therapy of inflammatory bowel disease. USA: People’s medical Publishing house. [Details]
	(2011)	'The intestinal microbiota in health and disease' Shanahan F (2011) 'The intestinal microbiota in health and disease' In: Integrative Gastroenterology. UK: Oxford University Press. [Details]
	(2010)	'Probiotics in Irritable Bowel Syndrome' Quigley EMM, Shanahan F; (2010) 'Probiotics in Irritable Bowel Syndrome' In: Nutritional Management of Digestive Disorders. Philadelphia: Taylor and Francis Group. [Details]
	(2010)	'50 Clinical Dilemmas in IBD' Quigley, EMM; Rampton, D; Irving, P; Shanahan, F; (2010) '50 Clinical Dilemmas in IBD' In: 50 Clinical Dilemmas in IBD. Blackwell Publishing: Blackwell Publishing. [Details]
	(2010)	'Thereapeutic manipulation of the microbiota in inflammatory bowel disease: antibiotics and probiotics' Keohane J, Shanahan F (2010) 'Thereapeutic manipulation of the microbiota in inflammatory bowel disease: antibiotics and probiotics' In: Inflammatory Bowel Disease. Translating basic science into clinical practice. UK: Wiley-Blackwell. [Details]
	(2010)	'The present and future of research and treatment in inflammatory bowel disease' Targan SR, Karp LC, Shanahan F (2010) 'The present and future of research and treatment in inflammatory bowel disease' In: Inflammatory Bowel Disease. Translating basic science into clinical practice. UK: Wiley-Blackwell. [Details]
	(2009)	'Gut microbiota and abnormal mucosal neuroendocrine immune activation' Spiller R, Shanahan F (2009) 'Gut microbiota and abnormal mucosal neuroendocrine immune activation' In: Functional Pain Syndromes: Presentation and Pathophysiology. Seattle: IASP Press. [Details]
	(2009)	'Lactobacillus in the gastrointestinal tract' Keohane J, Ryan K, Shanahan F (2009) 'Lactobacillus in the gastrointestinal tract' In: Lactobacillus molecular biology. From genomics to probiotics. UK: Caister Academic Press. [Details]
	(2009)	'Linking lifestyle with microbiota and risk of chronic inflammatory disorders' Shanahan F (2009) 'Linking lifestyle with microbiota and risk of chronic inflammatory disorders' In: The Hygiene Hypothesis and Darwinian Medicine. Basel/Switzerland: Birkhauser Verlag. [Details]
	(2006)	'The enteric bacterial flora and small bowel overgrowth' O'Mahony S, Shanahan F.; (2006) 'The enteric bacterial flora and small bowel overgrowth' In: Scleisenger & Fordtran. Textbook of Gastroenterology. [Details]
	(2004)	'Synbiotics in colon cancer' Bennett MF, Clune YE, Shanahan F, O'Sullivan G, Collins JK.; (2004) 'Synbiotics in colon cancer' In: Functional Foods: ageing and degenerative disease. [Details]
	(2004)	'Probiotics in inflammatory bowel disease' McCarthy J, Sheil B, O’Mahony L, Anwar MM, Shanahan F.; (2004) 'Probiotics in inflammatory bowel disease' In: Functional foods: ageing and degenerative disease. [Details]
	(2002)	'Mycobacterium paratuberculosis detected by nested PCR in intestinal granulomas isolated by LCM in cases of Crohn's disease' Ryan, Paul and Aarons, Simon and Bennett, Michael W. and Lee, Gary and O'Sullivan, Gerald C. and O'Connell, Joe and Shanahan, Fergus (2002) 'Mycobacterium paratuberculosis detected by nested PCR in intestinal granulomas isolated by LCM in cases of Crohn's disease' In: Methods in molecular biology (Clifton, N.J.). [Details]
	(2002)	'RT-PCR for the assessment of genetically heterogenous populations of the hepatitis C virus' Mullan, Brian and Fanning, Liam J. and Shanahan, Fergus and Sullivan, Daniel G. (2002) 'RT-PCR for the assessment of genetically heterogenous populations of the hepatitis C virus' In: Methods In Molecular Biology. London: Humana Press. [DOI] [Details]
	(2000)	'Probiotic bacteria and the human immune system' O'Mahony L, Feeny M, Dunne C, O'Halloran S, Murphy L, Kiely B, O'Sullivan GC, Shanahan F and Collins JK. (2000) 'Probiotic bacteria and the human immune system' In: Functional foods claims and evidence. London: British Nutrition Foundation / J. Royal Society of Chemistry. [Details]
	(1998)	'Adenocarcinoma of the oesophago gastric function. What is the role of suppression of T-lymphocyte function?' O'Sullivan GC, O'Brien MG, O'Connell J, Collins JK, and Shanahan F. ; (1998) 'Adenocarcinoma of the oesophago gastric function. What is the role of suppression of T-lymphocyte function?' In: The Esophagogastric Junction. Paris: John Libbey Eurotext. [Details]
	(1994)	'Immunosuppressive agents in inflammatory bowel disease' Shanahan F, O'Sullivan GC and Collins JK. (1994) 'Immunosuppressive agents in inflammatory bowel disease' In: Sutherland LR, Collins SM, Martin F, McLeod R, Targan SR, Wallace JL, Williams CN (eds). Inflammatory bowel disease: basic research clinical implications. Dordrecht, Netherlands: Kluwer academic publishers. [Details]
	(1992)	'Inflammatory Bowel Disease' Shanahan F, Targan S. (1992) 'Inflammatory Bowel Disease' In: Textbook of Internal Medicine. Philadelphia: J.B. Lippincott Co. [Details]
	(1991)	'Steroids and Inflammatory Bowel Disease' Kuritzkes R, Shanahan F. (1991) 'Steroids and Inflammatory Bowel Disease' In: Inflammatory Bowel Disease: Diagnosis and Treatment. New York &Tokyo: Igaku-Shoin. [Details]
	(1991)	'Immunology of Inflammatory Bowel Disease' Targan S, Karp L, Shanahan F. (1991) 'Immunology of Inflammatory Bowel Disease' In: Inflammatory Bowel Disease: Diagnosis and Treatment. New York & Tokyo: Igaku-Shoin. [Details]
	(1991)	'Immunologic Diseases: Gastrointestinal manifestations of immunodeficiency, hypersensitivity, and graft versus host disease' Shanahan F, Targan S. (1991) 'Immunologic Diseases: Gastrointestinal manifestations of immunodeficiency, hypersensitivity, and graft versus host disease' In: Textbook of Gastroenterology. Philadelphia: JB Lippincott Company. [Details]
	(1990)	'Food Allergy' Duerr R, Shanahan F. (1990) 'Food Allergy' In: Immunology and Immunopathology of the Liver and Gastrointestinal Tract. New York & Tokyo: Igaku-Shoin. [Details]
	(1990)	'Immunology of the liver and gastrointestinal tract: a perspective' Shanahan F., Targan S. (1990) 'Immunology of the liver and gastrointestinal tract: a perspective' In: Immunology and Immunopathology of the Liver and Gastrointestinal Tract. New York & Tokyo: Igaku-Shoin. [Details]
	(1990)	'Food allergy, eosinophilic gastroenteritis and systemic mastocytosis' Shanahan F. (1990) 'Food allergy, eosinophilic gastroenteritis and systemic mastocytosis' In: Current Therapy in Gastroenterology and Liver Disease. Hamilton, Ontario: B.C. Decker Inc. [Details]
	(1989)	'Role of natural effector cells in human gastrointestinal disease' Shanahan F, Targan S. (1989) 'Role of natural effector cells in human gastrointestinal disease' In: Functions of the Natural Immune System. New York: Plenum Publishing Corporation. [Details]
	(1989)	'Inflammatory Bowel Disease' Shanahan F, Targan S. (1989) 'Inflammatory Bowel Disease' In: Textbook of Internal Medicine. Philadelphia: J.B. Lippincott Co. [Details]
	(1989)	'The immunology of inflammatory bowel disease' Shanahan F, Targan S. (1989) 'The immunology of inflammatory bowel disease' In: Modern Concepts in Gastroenterology Volume 2. New York: Plenum Publishing Corporation. [Details]
	(1988)	'Ulcerative colitis and Crohn's Disease edited by' Shanahan F, Targan S. (1988) 'Ulcerative colitis and Crohn's Disease edited by' In: Current Therapy in Allergy, Immunology, and Rheumatology. Hamilton, Ontario: B.C. Decker Inc. [Details]
	(1988)	'Immunological mechanisms of liver injury' Shanahan F, Targan SR. (1988) 'Immunological mechanisms of liver injury' In: Principles and Practice of Gastroenterology and Hepatology. New York: Elsevier Science Publishing Co., Inc. [Details]
	(1986)	'Food allergy and adverse reactions: current status' Shanahan F, Targan SR. (1986) 'Food allergy and adverse reactions: current status' In: Modern Concepts in Gastroenterology. Volume 1. New York: Plenum Publishing Corporation. [Details]

‍

Professional Activities

‍

Honours and Awards

	Year	Title	Awarding Body
	2011	WIRM (World Immune Regulation Meeting V) Special Lecture: Death of a celebrity scientist. Davos, March 25, 2011	World Immune Regulation Meeting V, Davos, Switzerland.
	2011	23rd Morton I. Grossman distinguished lectureship, American Gastroenterological Association DDW, McCormick Place, Chicago, May 8th, 2011 Mining Microbes for Mankind – from science to society.	American Gastroenterology Association
	2010	DDW/AGA Presidential (Gail Hecht) Plenary Lecture: New Orleans, Monday May 3rd 2010 Microbiota in Digestive Health: promise, prospects and pragmatism.	American Gastroenterology Association
	2010	Named in top 50 Irish and Irish Americans in Bioscience, Irish Voice Thursday, May 20, 2010 www.irishcentral.com/business/lists/life_science_50	www.irishcentral.com/business/lists/life_science_50
	2010	St. Luke’s Day Keynote Lecture, How doctors think: staying fresh in changing times. Royal College of Physicians of Ireland, to be delivered Nov 5th, 2010	Royal College of Physicians of Ireland
	2009	David Sun Lecture at the American College of Gastroenterology, San Diego, October 24th, 2009 Gut Microbes – from bugs to drugs	American College of Gastroenterology
	2008	Schwabe-Walsh Lecture April 30th, 2008. University of California, Los Angeles. “Bioprospecting in the gut – from bugs to drugs”.	University of California at Los Angeles
	2008	25th Daniel Perey Public Lecture, McMaster University, Ontario, Canada, June 18th, 2008 Bioprospecting in the gut.	McMaster University, Ontario, Canada.
	2007	President of the Irish Society of Gastroenterology, April 2007-2009	Irish Society of Gastroenterology
	2006	First prize (gastroenterology) BMA book awards 2006 for Fast Facts in IBD by Rampton D & Shanahan F.	British Medical Association
	2006	Keynote speaker Broad Foundation annual scientific meeting, Los Angeles, March 2006	Broad Foundation
	2005	36th annual Kushlan Lecture and visiting professorship Yale school of medicine, New Haven, Feb 2nd, 2005 "Making Microbes work for Mankind".	Yale School of Medicine
	2003	Melrose Lecture at Royal College of Physicians & Surgeons, Glasgow 2003 Role of Bacteria in IBD	Royal College of Physicians & Surgeons, Glasgow
	2002	State-of-the-Art Lecture, American Gastroenterological Association, DDW, San Francisco May 2002. “Cellular and Molecular Basis of Probiotic Effects in Intestinal Disorders”	American Gastroenterological Association
	2001	State-of-the-Art Lecture, American Gastroenterological Association, DDW Atlanta May 2001. “Non-endoscopic diagnosis of inflammatory bowel disease”	American Gastroenterological Association
	2000	Sidney Truelove Lecture. “Probiotics – treatment of the future”. Oxford Sept 11, 2000.	? Oxford University
	2000	UCLA Schwabe lecture ‘IBD – an internet of genes, bacteria and T cells.’ and Arthur D. Schwabe visiting lectureship, University of California at Los Angeles (UCLA), US, June 28th, 2000.	University of California at Los Angeles (UCLA)
	1999	State-of-the-Art Lecture, American Gastroenterological Association, DDW Orlando May 1999. “Pathogenetic insights and new therapies in inflammatory bowel disease”	American Gastroenterological Association
	1998	First De Pazzi lecture, Mercy Hospital, Cork April 6, 1998. The clinical investigator: an endangered species, alive and well in Cork.	National University of Ireland Cork/Mercy University Hospital, Cork, Ireland.
	1995	The 35th Graves Lecture & Medal. Lecture title: Inflammatory bowel disease: from molecular mechanisms to new therapeutic strategies, Dublin.	The Royal Academy of Medicine in Ireland and Health Research Board of Ireland
	1993	State-of-the-art Lecture & Medal, the Irish Society of Gastroenterology: Lecture title: 'Inflammatory bowel disease: modern concepts of pathogenesis & treatment', November 1993.	Irish Society of Gastroenterology
	1985	AGA Research Training Award. (June/85-July/86)	American Gastroenterological Association
	1982	Canadian Foundation for Ileitis/Colitis 'Promising Young Investigator' Award. 1982	Canadian Foundation for Ileitis/Colitis
	1982	Travelling Studentship in Medicine of National University of Ireland (1982-1984)	National University of Ireland
	1977	Gold Medal in Medicine, Mater Misericordiae Hospital, Dublin, Ireland.	Mater Misericordiae Hospital, Dublin, Ireland
	1976	Leonard Prize (Medicine), Mater Misericordiae Hospital, Dublin, Ireland	Mater Misericordiae Hospital Dublin Ireland
	1975	First Place, Irish Inter-University Clinico-Pathology Competition (team member).	National University of Ireland
	1975	Dillon Memorial Prize for Pharmacology & Therapeutics	NUI, University College Dublin

‍

Professional Associations

	Association	Function	From / To
	Royal College of Physicians of the United Kingdom	Fellow	/
	Royal College of Physicians of Ireland	Fellow	/
	Western Society for Clinical Investigation	Member	/
	American Federation for Clinical Research	Member	/
	Royal Academy of Medicine in Ireland	Fellow	/
	Society of Mucosal Immunology	Fellow	/
	The Corrigan Club of Ireland	Member	/
	Association of Physicians of Great Britain and Ireland	Member	/
	Royal College of Physicians and Surgeons of Canada	Fellow	/
	American College of Physicians	Fellow	/
	Irish Society for Gastroenterology	Member	/
	American Gastroenterology Association	Fellow	/
	American Association for the Advancement of Science	Member	/
	Clinical Immunology Society	Member	/
	American Association of Immunologists	Member	/

‍

Patents

	Patent Number	Title	Granted
	ALIM26/C/WO-PCT	A product (Bifidobacterium).	01-JAN-11
	ALIM25/C/WO-PCT	A product (Lactobacillus paracasei).	01-JAN-11
	ALIM24/C/WO-PCT	A product (Lactobacillus salivarius).	01-JAN-11
	ALIM01/C/WO-PCT	A probiotic product.	01-JAN-11
	ENT002/C/WO-PCT	Bifidobacterium in the treatment of inflammatory disease.	01-JAN-11
	ENT001/C/WO-PCT	Use of Lactobacillus salivarius.	01-JAN-11

‍

Languages

	Language	Reading	Writing	Speaking
	English	Fluent	Fluent	Fluent

‍

Journal Activities

	Journal	Role	To / From
	Gut	Member of Editorial Board	01-JAN-02 - 31-DEC-05
	American Journal Of Gastroenterology	Member of Editorial Board	01-JAN-97 - 31-DEC-06

‍

Teaching Activities

‍

Teaching Interests

I place emphasis on learning over teaching and endeavour to make up for the inadequacies of this university by creating an environment conducive to the promotion of learning, research and innovation and to the stimulation of critical thinking by our students rather than traditional rote teaching.