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Dive into the research topics where Julia Eckenberger is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
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Combining mucosal microbiome and host multi-omics data shows prognostic potential in paediatric ulcerative colitis
Kulecka, M., O’Sullivan, J., Fitzgerald, R., Velikonja, A., Huseyin, C. E., Laserna-Mendieta, E. J., Ruiz-Limón, P., Eckenberger, J., Vidal-Marín, M., Truppel, B. A., Singh, R., Naik, S., Croft, N. M., Temko, A., Zomer, A., MacSharry, J., Melgar, S., Deb, P., Sanderson, I. R. & Claesson, M. J., Dec 2025, In: Nature Communications. 16, 1, 7157.Research output: Contribution to journal › Article › peer-review
Open Access -
Cold stress initiates catecholaminergic and serotonergic responses in the chicken gut that are associated with functional shifts in the microbiome
Lyte, J. M., Eckenberger, J., Keane, J., Robinson, K., Bacon, T., Assumpcao, A. L. F. V., Donoghue, A. M., Liyanage, R., Daniels, K. M., Caputi, V. & Lyte, M., Mar 2024, In: Poultry Science. 103, 3, 103393.Research output: Contribution to journal › Article › peer-review
Open Access -
The developing pig respiratory microbiome harbors strains antagonistic to common respiratory pathogens
Vlasblom, A. A., Duim, B., Patel, S., Luiken, R. E. C., Crespo-Piazuelo, D., Eckenberger, J., Huseyin, C. E., Lawlor, P. G., Elend, C., Wagenaar, J. A., Claesson, M. J. & Zomer, A. L., Oct 2024, In: mSystems. 9, 10Research output: Contribution to journal › Article › peer-review
Open Access -
Machine learning approaches in microbiome research: challenges and best practices
Papoutsoglou, G., Tarazona, S., Lopes, M. B., Klammsteiner, T., Ibrahimi, E., Eckenberger, J., Novielli, P., Tonda, A., Simeon, A., Shigdel, R., Béreux, S., Vitali, G., Tangaro, S., Lahti, L., Temko, A., Claesson, M. J. & Berland, M., 2023, In: Frontiers in Microbiology. 14, 1261889.Research output: Contribution to journal › Review article › peer-review
Open Access -
Author Correction: Biopsy bacterial signature can predict patient tissue malignancy (Scientific Reports, (2021), 11, 1, (18535), 10.1038/s41598-021-98089-3)
Hogan, G., Eckenberger, J., Narayanen, N., Walker, S. P., Claesson, M. J., Corrigan, M., O’Hanlon, D. & Tangney, M., Dec 2022, In: Scientific Reports. 12, 1, 19592.Research output: Contribution to journal › Comment/Debate
Open Access
Press/Media
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University College Cork Researchers Publish New Studies and Findings in the Area of Inflammatory Bowel Disease (Interactions between Medications and the Gut Microbiome in Inflammatory Bowel Disease)
Eckenberger, J., Claesson, M. & Shanahan, F.
8/11/22
1 item of Media coverage
Press/Media