Darned in 2013: Inclusion of model organisms and linking with Wikipedia

Anmol M. Kiran; John J. O'Mahony; Komal Sanjeev; Pavel V. Baranov

doi:10.1093/nar/gks961

Darned in 2013: Inclusion of model organisms and linking with Wikipedia

Anmol M. Kiran
, John J. O'Mahony
, Komal Sanjeev
, Pavel V. Baranov

School of Biochemistry and Cell Biology

Research output: Contribution to journal › Article › peer-review

Abstract

DARNED (DAtabase of RNa EDiting, available at http://darned.ucc.ie) is a centralized repository of reference genome coordinates corresponding to RNA nucleotides having altered templated identities in the process of RNA editing. The data in DARNED are derived from published datasets of RNA editing events. RNA editing instances have been identified with various methods, such as bioinformatics screenings, deep sequencing and/or biochemical techniques. Here we report our current progress in the development and expansion of the DARNED. In addition to novel database features the DARNED update describes inclusion of Drosophila melano-gaster and Mus musculus RNA editing events and the launch of a community-based annotation in the RNA WikiProject.

Original language	English
Pages (from-to)	D258-D261
Journal	Nucleic Acids Research
Volume	41
Issue number	D1
DOIs	https://doi.org/10.1093/nar/gks961
Publication status	Published - 1 Jan 2013

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https://hdl.handle.net/10468/5021Licence: CC BY-NC

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abstract = "DARNED (DAtabase of RNa EDiting, available at http://darned.ucc.ie) is a centralized repository of reference genome coordinates corresponding to RNA nucleotides having altered templated identities in the process of RNA editing. The data in DARNED are derived from published datasets of RNA editing events. RNA editing instances have been identified with various methods, such as bioinformatics screenings, deep sequencing and/or biochemical techniques. Here we report our current progress in the development and expansion of the DARNED. In addition to novel database features the DARNED update describes inclusion of Drosophila melano-gaster and Mus musculus RNA editing events and the launch of a community-based annotation in the RNA WikiProject.",

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Darned in 2013: Inclusion of model organisms and linking with Wikipedia

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