Standardized annotation of translated open reading frames

Jonathan M. Mudge; Jorge Ruiz-Orera; John R. Prensner; Marie A. Brunet; Ferriol Calvet; Irwin Jungreis; Jose Manuel Gonzalez; Michele Magrane; Thomas F. Martinez; Jana Felicitas Schulz; Yucheng T. Yang; M. Mar Albà; Julie L. Aspden; Pavel V. Baranov; Ariel A. Bazzini; Elspeth Bruford; Maria Jesus Martin; Lorenzo Calviello; Anne Ruxandra Carvunis; Jin Chen; Juan Pablo Couso; Eric W. Deutsch; Paul Flicek; Adam Frankish; Mark Gerstein; Norbert Hubner; Nicholas T. Ingolia; Manolis Kellis; Gerben Menschaert; Robert L. Moritz; Uwe Ohler; Xavier Roucou; Alan Saghatelian; Jonathan S. Weissman; Sebastiaan van Heesch

doi:10.1038/s41587-022-01369-0

Standardized annotation of translated open reading frames

Jonathan M. Mudge
, Jorge Ruiz-Orera
, John R. Prensner
, Marie A. Brunet
, Ferriol Calvet
, Irwin Jungreis
, Jose Manuel Gonzalez
, Michele Magrane
, Thomas F. Martinez
, Jana Felicitas Schulz
, Yucheng T. Yang
, M. Mar Albà
, Julie L. Aspden
, Pavel V. Baranov
, Ariel A. Bazzini
, Elspeth Bruford
, Maria Jesus Martin
, Lorenzo Calviello
, Anne Ruxandra Carvunis
, Jin Chen

Juan Pablo Couso, Eric W. Deutsch, Paul Flicek, Adam Frankish, Mark Gerstein, Norbert Hubner, Nicholas T. Ingolia, Manolis Kellis, Gerben Menschaert, Robert L. Moritz, Uwe Ohler, Xavier Roucou, Alan Saghatelian, Jonathan S. Weissman, Sebastiaan van Heesch

School of Biochemistry and Cell Biology

European Molecular Biology Laboratory
Max Delbrück Center for Molecular Medicine in the Helmholtz Association
Broad Institute
Dana-Farber Cancer Institute
Boston Children's Hospital
Université de Sherbrooke
Massachusetts Institute of Technology
Salk Institute for Biological Studies
University of California at Irvine
Yale University
Hospital del Mar
ICREA
University of Leeds
Stowers Institute for Medical Research
University of Kansas
University of Cambridge
Human Technopole
University of Pittsburgh
University of Texas Southwestern Medical Center
CSIC-UPO
Institute for Systems Biology
Charité – Universitätsmedizin Berlin
German Centre for Cardiovascular Research
California Institute for Quantitative Biosciences
Ghent University
Humboldt University of Berlin
Whitehead Institute
Princess Máxima Center for Pediatric Oncology

Research output: Contribution to journal › Letter › peer-review

Original language	English
Pages (from-to)	994-999
Number of pages	6
Journal	Nature Biotechnology
Volume	40
Issue number	7
DOIs	https://doi.org/10.1038/s41587-022-01369-0
Publication status	Published - Jul 2022

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10.1038/s41587-022-01369-0

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Mudge, J. M., Ruiz-Orera, J., Prensner, J. R., Brunet, M. A., Calvet, F., Jungreis, I., Gonzalez, J. M., Magrane, M., Martinez, T. F., Schulz, J. F., Yang, Y. T., Albà, M. M., Aspden, J. L., Baranov, P. V., Bazzini, A. A., Bruford, E., Martin, M. J., Calviello, L., Carvunis, A. R., ... van Heesch, S. (2022). Standardized annotation of translated open reading frames. Nature Biotechnology, 40(7), 994-999. https://doi.org/10.1038/s41587-022-01369-0

@article{e1363bc45fc340a9b7850aed4a48389b,

title = "Standardized annotation of translated open reading frames",

author = "Mudge, \{Jonathan M.\} and Jorge Ruiz-Orera and Prensner, \{John R.\} and Brunet, \{Marie A.\} and Ferriol Calvet and Irwin Jungreis and Gonzalez, \{Jose Manuel\} and Michele Magrane and Martinez, \{Thomas F.\} and Schulz, \{Jana Felicitas\} and Yang, \{Yucheng T.\} and Alb{\`a}, \{M. Mar\} and Aspden, \{Julie L.\} and Baranov, \{Pavel V.\} and Bazzini, \{Ariel A.\} and Elspeth Bruford and Martin, \{Maria Jesus\} and Lorenzo Calviello and Carvunis, \{Anne Ruxandra\} and Jin Chen and Couso, \{Juan Pablo\} and Deutsch, \{Eric W.\} and Paul Flicek and Adam Frankish and Mark Gerstein and Norbert Hubner and Ingolia, \{Nicholas T.\} and Manolis Kellis and Gerben Menschaert and Moritz, \{Robert L.\} and Uwe Ohler and Xavier Roucou and Alan Saghatelian and Weissman, \{Jonathan S.\} and \{van Heesch\}, Sebastiaan",

year = "2022",

month = jul,

doi = "10.1038/s41587-022-01369-0",

language = "English",

volume = "40",

pages = "994--999",

journal = "Nature Biotechnology",

issn = "1087-0156",

publisher = "Nature Research",

number = "7",

}

Mudge, JM, Ruiz-Orera, J, Prensner, JR, Brunet, MA, Calvet, F, Jungreis, I, Gonzalez, JM, Magrane, M, Martinez, TF, Schulz, JF, Yang, YT, Albà, MM, Aspden, JL, Baranov, PV, Bazzini, AA, Bruford, E, Martin, MJ, Calviello, L, Carvunis, AR, Chen, J, Couso, JP, Deutsch, EW, Flicek, P, Frankish, A, Gerstein, M, Hubner, N, Ingolia, NT, Kellis, M, Menschaert, G, Moritz, RL, Ohler, U, Roucou, X, Saghatelian, A, Weissman, JS & van Heesch, S 2022, 'Standardized annotation of translated open reading frames', Nature Biotechnology, vol. 40, no. 7, pp. 994-999. https://doi.org/10.1038/s41587-022-01369-0

TY - JOUR

T1 - Standardized annotation of translated open reading frames

AU - Mudge, Jonathan M.

AU - Ruiz-Orera, Jorge

AU - Prensner, John R.

AU - Brunet, Marie A.

AU - Calvet, Ferriol

AU - Jungreis, Irwin

AU - Gonzalez, Jose Manuel

AU - Magrane, Michele

AU - Martinez, Thomas F.

AU - Schulz, Jana Felicitas

AU - Yang, Yucheng T.

AU - Albà, M. Mar

AU - Aspden, Julie L.

AU - Baranov, Pavel V.

AU - Bazzini, Ariel A.

AU - Bruford, Elspeth

AU - Martin, Maria Jesus

AU - Calviello, Lorenzo

AU - Carvunis, Anne Ruxandra

AU - Chen, Jin

AU - Couso, Juan Pablo

AU - Deutsch, Eric W.

AU - Flicek, Paul

AU - Frankish, Adam

AU - Gerstein, Mark

AU - Hubner, Norbert

AU - Ingolia, Nicholas T.

AU - Kellis, Manolis

AU - Menschaert, Gerben

AU - Moritz, Robert L.

AU - Ohler, Uwe

AU - Roucou, Xavier

AU - Saghatelian, Alan

AU - Weissman, Jonathan S.

AU - van Heesch, Sebastiaan

PY - 2022/7

Y1 - 2022/7

UR - https://www.scopus.com/pages/publications/85134223343

U2 - 10.1038/s41587-022-01369-0

DO - 10.1038/s41587-022-01369-0

M3 - Letter

C2 - 35831657

AN - SCOPUS:85134223343

SN - 1087-0156

VL - 40

SP - 994

EP - 999

JO - Nature Biotechnology

JF - Nature Biotechnology

IS - 7

ER -

Standardized annotation of translated open reading frames

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