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4. Jian Huang

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Biography

Educations:

1997                Ph.D.(University College Dublin, Dublin, Ireland)

1987                MSc (North-Western Polytechnic University, Xian, China)

1982                BSc (Chongqing University, Chongqing, China)

 

 

 

 

Experience:

  2000-2001: Statistician                          NMRC, University College Cork  

  1987-1996:    Lecture                                 Fuling Teachers College, China

  1982-1984    Teaching assistant                 Fuling Teachers College, China

Research Interest:

Modeling large spatio-temporal data, Time series analysis, Emission tomography, Inverse problems, Medical image data analysis.

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Research Interests

emission tomography, inverse problems, non-linear regularization,  time series analysis.‍

Publications

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Peer Reviewed Journals

	Year	Publication
	(2014)	'An Analysis of Whole Body Tracer Kinetics in Dynamic PET Studies With Application to Image-Based Blood Input Function Extraction' Huang, J,O'Sullivan, F (2014) 'An Analysis of Whole Body Tracer Kinetics in Dynamic PET Studies With Application to Image-Based Blood Input Function Extraction'. IEEE Transactions On Medical Imaging, 33 :1093-1108 [DOI] [Details]
	(2012)	'Kinetic analysis of dynamic positron emission tomography data using open-source image processing and statistical inference tools' D. Hawe and F. Hernandez Fernandez and L. O'Suilleabháin and E. Wolsztynski and J. Huang and F. O’Sullivan (2012) 'Kinetic analysis of dynamic positron emission tomography data using open-source image processing and statistical inference tools'. WIREs Computational Statistics, [Details]
	(2012)	'A Fully Automatic Procedure for Image Derived Blood Extraction, Including Assessment of Metabolite, in Dynamic PET Fluorothymidine (FLT) Studies' F. O'Sullivan , M. Muzi , J. Huang , J.F. Eary , J. Link , K.A. Krohn (2012) 'A Fully Automatic Procedure for Image Derived Blood Extraction, Including Assessment of Metabolite, in Dynamic PET Fluorothymidine (FLT) Studies'. European Journal of Cancer, 48 (6) [DOI] [Details]
	(2012)	'Plane-wave Sf S reconstruction of water surface characteristics from Lambertian reflectance data' Huang, J,O'Sullivan, F,Jike, L (2012) 'Plane-wave Sf S reconstruction of water surface characteristics from Lambertian reflectance data'. Inverse Problems, 28 [DOI] [Details]
	(2009)	'Classification of array CGH data using smoothed logistic regression model' Huang, J., Salim, A., Lei, K., O'Sullivan, K., Pawitan, Y. (2009) 'Classification of array CGH data using smoothed logistic regression model'. Statistics In Medicine, 28 :3798-3810 [DOI] [Details]
	(2008)	'Effect of pH and addition of corn oil on the properties of whey protein isolate-based films using response surface methodology' Wang, L.; Liu, L.; Holmes, J. D.; Huang, J.; Kerry, J. F.; kerry, J. P.; (2008) 'Effect of pH and addition of corn oil on the properties of whey protein isolate-based films using response surface methodology'. International Journal of Food Science & Technology, 43 :787-796   [Details]
	(2008)	'Regularized Reconstruction of Water Surfaces from Noisy Gradient Information using Plane Wave Superposition' O¿Sullivan, F., Huang, J., Roy Choudhury, K., Caulliez, G., Shrira, V.,; (2008) 'Regularized Reconstruction of Water Surfaces from Noisy Gradient Information using Plane Wave Superposition'. Inverse Problems, 24 (034016) [Details]
	(2008)	'Retrospective analysis of chronic hepatitis C in untreated patients with nonlinear mixed effects model' Jian Huang, Kathleen O’Sullivan, John Levis, Elizabeth Kenny-Walsh, Orla Crosbie, Liam Fanning (2008) 'Retrospective analysis of chronic hepatitis C in untreated patients with nonlinear mixed effects model'. J. Biomedical Science and Engineering, (1):85-90 [DOI] [Details]
	(2007)	'Robust smooth segmentation approach for array CGH data analysis' Huang, J,Gusnanto, A,O'Sullivan, K,Staaf, J,Borg, A,Pawitan, Y (2007) 'Robust smooth segmentation approach for array CGH data analysis'. Bioinformatics (Oxford, England), 23 :2463-2469 [DOI] [Details]
	(2003)	'Constrained clustering of irregularly sampled spatial data' Pawitan, Y,Huang, J; (2003) 'Constrained clustering of irregularly sampled spatial data'. Rna-A Publication of The Rna Society, 73 :853-865 [DOI] [Details]
	(2003)	'Variable selection in random calibration of near-infrared instruments: ridge regression and partial least squares regression settings' Gusnanto, A,Pawitan, Y,Huang, J,Lane, B (2003) 'Variable selection in random calibration of near-infrared instruments: ridge regression and partial least squares regression settings'. Journal of Chemometrics, 17 :174-185 [DOI] [Details]
	(2002)	'Development of a micro-spectrometer system for process control application' Brennan, D and Alderman, J and Sattler, L and Walshe, J and Huang, J and O'Connor, B and O'Mathuna, C (2002) 'Development of a micro-spectrometer system for process control application'. INFRARED PHYSICS \& TECHNOLOGY, 43 (2):69-76 [DOI] [Details]
	(2002)	'A comparison of calibration methods based on calibration data size and robustness' Huang, J and Brennan, D and Sattler, L and Alderman, J and Lane, B and O'Mathuna, C (2002) 'A comparison of calibration methods based on calibration data size and robustness'. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 62 (1):25-35 [DOI] [Details]
	(2000)	'Quasi-likelihood estimation of non-invertible moving average processes' Huang, J,Pawitan, Y; (2000) 'Quasi-likelihood estimation of non-invertible moving average processes'. Rna-A Publication of The Rna Society, 27 :689-702 [Details]
	(1999)	'Consistent Estimation for Non-Gaussian Non-Causal Autoregessive Processes' Jian, Huang and Pawitan, Yudi (1999) 'Consistent Estimation for Non-Gaussian Non-Causal Autoregessive Processes'. Journal of Time Series Analysis, 20 (4):417-423   [DOI] [Details]

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Conference Publications

	Year	Publication
	(2014)	IEEE Nuclear Science Symposium and Medical Imaging Conference Huang J, O’Sullivan F, Wolsztynski E, Muzi M and Krohn K (2014) A modified FBP algorithm for reconstruction of images when there are high activity regions in the field of view IEEE Nuclear Science Symposium and Medical Imaging Conference Seattle, WA, USA, [Details]
	(2014)	2014 IEEE Nuclear Science Symposium and Medical Imaging Conference T. Mou, J. Huang, Y. Zhang, B Elston, P Kinahan, M. Muzi, A. Opanowski, and F. O’Sullivan (2014) Spatial Covariance Characteristics in a Collection of 3-D PET scanners used in Clinical Imaging Trials 2014 IEEE Nuclear Science Symposium and Medical Imaging Conference [Details]
	(2013)	IEEE Nuclear Science Symposium and Medical Imaging Conference Huang J, Wolsztynski E, Hawe D, Kim K-M, Choudhury KR and O'Sullivan F (2013) A cautionary note on the use of positivity constrained reconstructions for quantification of regional PET imaging data IEEE Nuclear Science Symposium and Medical Imaging Conference Seoul, Korea, [Details]
	(2013)	Society of Nuclear Medicine and Molecular Imaging Annual Meeting O'Sullivan F, Huang J, Muzi M, Wolsztynski E, O’Sullivan J, Fink J, Rockhill J, Eary J, Krohn K (2013) Validation of an image derived blood time course extraction method for quantitation of dynamic PET [F-18]-Fluorothymidine (FLT) studies in brain cancer patients Society of Nuclear Medicine and Molecular Imaging Annual Meeting Vancouver, BC, Canada, [Details]
	(2011)	Society of Nuclear Medicine Annual Meeting 2011, San Antonio, Texas, June 4-8 F. O'Sullivan and J. Huang and N. Fitzgerald and M. Muzi and K. Krohn (2011) A physiological model for representation of tracer activity in re-circulating venous and arterial blood Society of Nuclear Medicine Annual Meeting 2011, San Antonio, Texas, June 4-8 [Details]
	(2011)	IEEE Nuclear Science Symposium, Medical 23-29 October 2011, Valencia, Spain J. Huang and F. O’Sullivan and J. N. O’Sullivan (2011) Representation of the Arterial Input Function using a Markov Chain Whole-Body Circulation Model IEEE Nuclear Science Symposium, Medical 23-29 October 2011, Valencia, Spain [Details]
	(2011)	IEEE Nuclear Science Symposium, Medical 23-29 October 2011, Valencia, Spain D. Hawe and F. Hernandez Fernandez and J. Huang and M. Muzi and F. O’Sullivan (2011) Regional Kinetic Summaries of Dynamic PET Time- Course Data: Model the Average or Average the Model? IEEE Nuclear Science Symposium, Medical 23-29 October 2011, Valencia, Spain [Details]
	(2010)	IEEE 2010 Nuclear Science Symposium and Medical Imaging inproceedings, Knoxville, Tennessee , 30-OCT-10 - 06-NOV-10 N. Fitzgerald and F. O'Sullivan and J. Huang and M. Muzi and G. S. Newman and J. D. Unadkat and T. L. Richards and K. A. Krohn (2010) A Physiological Model for Representation of Arterial Tracer Concentration Time Courses in Dynamic Imaging Studies with CT, PET and MR IEEE 2010 Nuclear Science Symposium and Medical Imaging inproceedings, Knoxville, Tennessee , 30-OCT-10 - 06-NOV-10 [Details]
	(2010)	IEEE 2010 Nuclear Science Symposium and Medical Imaging inproceedings, Knoxville, Tennessee , 30-OCT-10 - 06-NOV-10 J. Huang and F. O'Sullivan and N. Fitzgerald and M. Muzi and D. Unadkat and K. A. Krohn (2010) Image Based Extraction of the Artieral Input Function in Cerebral PET Studies with O-15 Wate IEEE 2010 Nuclear Science Symposium and Medical Imaging inproceedings, Knoxville, Tennessee , 30-OCT-10 - 06-NOV-10 [Details]
	(2010)	CASI 2010, May, Portrush, North. Ireland J. Huang and F. O’Sullivan (2010) Tomographic Reconstruction of Water Surface Characteristics from Lambertian Reflectance CASI 2010, May, Portrush, North. Ireland [Details]
	(2008)	2nd International Conference on Bioinformatics and Biomedical Engineering (iCBBE) Huang J., O'Sullivan, K., Kenny-Wlash, E., Crosbie, O., Lewis, J., Fanning, L.J. (2008) Nonlinear Mixed Effects Modelling Viral Load in Untreated Patients with Chronic Hepatitis C 2nd International Conference on Bioinformatics and Biomedical Engineering (iCBBE) China, [Details]
	(2007)	inproceedings of Applied Statistics in Ireland S. O’Neill and J. Huang and K. O’Sullivan and C. von Gertten (2007) Statistical Significance in the Analysis of Gene Expression Data inproceedings of Applied Statistics in Ireland [Details]
	(2007)	inproceedings of Applied Statistics in Ireland K. O’Sullivan and S. O’Neill, and J. O’Mullane, and J. Huang and M. Rea and D. Cadogan (2007) Central Composite Design Applied to Drug Production inproceedings of Applied Statistics in Ireland [Details]
	(2006)	CASI 2006 May, Killarney, Co. Kerry, Ireland J. Huang and F. O’Sullivan and K. Roy Choudhury (2006) Reconstruction of Lambertian Surface via Ridge Function Expansions CASI 2006 May, Killarney, Co. Kerry, Ireland [Details]
	(2006)	Analysis of array CGH data: identification of genomic alteration regions J. Huang and K. O’Sullivan and Y. Pawitan (2006) Analysis of array CGH data: identification of genomic alteration regions Analysis of array CGH data: identification of genomic alteration regions [Details]
	(2006)	Proceedings of the 26th Conference on Applied Statistics in Ireland Huang, J., Roy Choudhury, K., O¿Sullivan, F.; (2006) Reconstruction of Lambertian Surfaces via Ridge Function Expansions Proceedings of the 26th Conference on Applied Statistics in Ireland Ireland, , pp.116-117 [Details]

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Professional Activities

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Professional Associations

	Association	Function	From / To
	Irish Statistical Association	Member	05-MAY-97 /

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Employment

	Employer	Position	From / To
	University College Cork	Post-doctoral Researcher	01-JUL-99 /
	Fuling Teachers College, China	Lecturer	01-MAR-87 / 01-SEP-93
	Fuling Teachers College, China	Teaching assistant	01-SEP-82 / 01-SEP-84
	University College Cork	Researcher/ Assistant Consultant Statistician	01-JUL-12 /
	University College Cork	Boole Fellow	01-JAN-98 / 30-JUN-99

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Education

	Year	Institution	Qualification	Subject
	1982	Chongqing University, Chongqing, China	BSC (HONS)	Applied Mathematics
	1987	North-Western Polytechnic University, Xian, China	MSc	Applied Statistics
	1997	University College Dublin	PHD	Statistics

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Outreach Activities

	Description
	invited to give a talk at Capital University Medical University, Beijing; Beijing Technology and Business University, Beijing; Chongqing University, Chongqing South western University of Finance and Economics, Chengdu; Civil Aviation University of China, Tianjin, etc.

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Journal Activities

	Journal	Role	To / From
	Bimetrics	Referee	19-JUL-08 -