Biography

Educations:
1997  Ph.D.      University College Dublin, Dublin, Ireland
1987  MSc       North-Western Polytechnic University, Xian, China
1982  BSc       Chongqing University, Chongqing, China
Experience:  
1998-1999    Boole Fellow           University College Cork
1987-1996    Lecturer                   Fuling Teachers College, China  
1982-1984   Teaching assistant    Fuling Teachers College, China
Research Interest:
Modeling large spatio-temporal data, Time series analysis, Inverse problems, Medical image data

Research Interests

Modeling large spatio-temporal data, Time series analysis, Inverse problems, Medical image data 

Peer Reviewed Journals

  Year Publication
(2025) 'Non-uniform Fourier transform based image classification in single-particle Cryo-EM'
Zijian Bai and Jian Huang (2025) 'Non-uniform Fourier transform based image classification in single-particle Cryo-EM'. Journal Of Structural Biology: X, [Details]
(2025) 'Enhanced NSCLC subtyping and staging through attention-augmented multi-task deep learning: A novel diagnostic tool'
Runhuang Yang, Weiming Li, Siqi Yu, Zhiyuan Wu, Haiping Zhang, Xiangtong Liu, Lixin Tao, Xia Li, Jian Huang, Xiuhua Guo (2025) 'Enhanced NSCLC subtyping and staging through attention-augmented multi-task deep learning: A novel diagnostic tool'. International Journal of Medical Informatics, [Details]
(2024) 'Development and external validation of a multimodal integrated feature neural network (MIFNN) for the diagnosis of malignancy in small pulmonary nodules (<10 mm)'
Yang R.; Zhang Y.; Li W.; Li Q.; Liu X.; Zhang F.; Liang Z.; Huang J.; Li X.; Tao L.; Guo X (2024) 'Development and external validation of a multimodal integrated feature neural network (MIFNN) for the diagnosis of malignancy in small pulmonary nodules (<10 mm)'. Biomedical Physics & Engineering Express, [Details]
(2024) 'Deep Learning Model for Pathological Grading and Prognostic Assessment of Lung Cancer Using CT Imaging: A Study on NLST and External Validation Cohorts'
Runhuang Yang, Weiming Li, Siqi Yu, Zhiyuan Wu, Haiping Zhang, Xiangtong Liu, Lixin Tao, Xia Li, Jian Huang, Xiuhua Guo (2024) 'Deep Learning Model for Pathological Grading and Prognostic Assessment of Lung Cancer Using CT Imaging: A Study on NLST and External Validation Cohorts'. Academic Radiology, [Details]
(2023) ''Patient-adaptive Population-based Modeling of Arterial Input Functions'
Z. Xiu, M. Muzi, J. Huang, E. Wolsztynski (2023) ''Patient-adaptive Population-based Modeling of Arterial Input Functions'. IEEE Transactions In Medical Imaging, [Details]
(2021) 'Texture feature-based machine learning classifier could assist in the diagnosis of COVID-19'
Wu, ZY;Li, L;Jin, RH;Liang, LC;Hu, ZJ;Tao, LX;Han, Y;Feng, W;Zhou, D;Li, WM;Lu, QB;Liu, W;Fang, LQ;Huang, J;Gu, Y;Li, HJ;Guo, XH (2021) 'Texture feature-based machine learning classifier could assist in the diagnosis of COVID-19'. European Journal of Radiology, 137 [DOI] [Details]
(2020) 'Spatial Auto-Regressive Analysis of Correlation in 3-D PET with Application to Model-Based Simulation of Data'
Huang J.;Mou T.;O'Regan K.;O'Sullivan F. (2020) 'Spatial Auto-Regressive Analysis of Correlation in 3-D PET with Application to Model-Based Simulation of Data'. IEEE Transactions On Medical Imaging, 39 (4):964-974 [DOI] [Details]
(2020) 'Histologic subtype classification of non-small cell lung cancer using PET/CT images'
Han, Y;Ma, Y;Wu, ZY;Zhang, F;Zheng, DQ;Liu, XT;Tao, LX;Liang, ZG;Yang, Z;Li, X;Huang, J;Guo, XH (2020) 'Histologic subtype classification of non-small cell lung cancer using PET/CT images'. European Journal of Nuclear Medicine and Molecular Imaging, [DOI] [Details]
(2019) 'Three-Dimensional Texture Feature Analysis of Pulmonary Nodules in CT Images: Lung Cancer Predictive Models Based on Support Vector Machine Classifier'
Gao N.;Tian S.;Li X.;Huang J.;Wang J.;Chen S.;Ma Y.;Liu X.;Guo X. (2019) 'Three-Dimensional Texture Feature Analysis of Pulmonary Nodules in CT Images: Lung Cancer Predictive Models Based on Support Vector Machine Classifier'. Journal Of Digital Imaging, [DOI] [Details]
(2019) 'Distributed Optimization Algorithm for Discrete-time Heterogeneous Multi-agent Systems with Nonuniform Stepsize'
Mo, L. Li, J. and Huang, J. (2019) 'Distributed Optimization Algorithm for Discrete-time Heterogeneous Multi-agent Systems with Nonuniform Stepsize'. Ieee Access, 7 :87303-87312 [DOI] [Details]
(2018) 'Assessment of a statistical AIF extraction method for dynamic PET studies with 15O water and 18F fluorodeoxyglucose in locally advanced breast cancer patients'
O'Sullivan F, O'Sullivan JN, Huang J, Doot R, Muzi M, Schubert E, Peterson L, Dunnwald LK, Mankoff DM (2018) 'Assessment of a statistical AIF extraction method for dynamic PET studies with 15O water and 18F fluorodeoxyglucose in locally advanced breast cancer patients'. Journal Of Medical Imaging, [Details]
(2018) 'Intra-tumoural heterogeneity characterization through texture and colour analysis for differentiation of non-small cell lung carcinoma subtypes'
Ma, Yuan; Feng, Wei; Wu, Zhiyuan; Liu, Mengyang; Zhang, Feng; Liang, Zhigang; Cui, Chunlei; Huang, Jian; Li, Xia; Guo, Xiuhua (2018) 'Intra-tumoural heterogeneity characterization through texture and colour analysis for differentiation of non-small cell lung carcinoma subtypes'. Physics In Medicine & Biology, 63 (16) [ Publisher's Version] [DOI] [Full Text] [Details]
(2018) 'Tumor heterogeneity measurement using [18F] FDG PET/CT shows prognostic value in patients with non-small cell lung cancer'
Hughes, N.M., Mou, T, O’Regan, K.N., Murphy, P. O'Sullivan, J.N., Wolsztynski, E., Huang, J., Kennedy, M.P., Eary J.F. and O’Sullivan, F. (2018) 'Tumor heterogeneity measurement using [18F] FDG PET/CT shows prognostic value in patients with non-small cell lung cancer'. European Journal of Hybrid Imaging, [Details]
(2017) 'The Gamma Characteristic of Reconstructed PET Images: Implications for ROI Analysis'
Mou, Tian; Huang, Jian; O’Sullivan, Finbarr (2017) 'The Gamma Characteristic of Reconstructed PET Images: Implications for ROI Analysis'. IEEE Transactions On Medical Imaging, PP [DOI] [Full Text] [Details]
(2018) 'Contourlet-based hippocampal magnetic resonance imaging texture features for multivariant classification and prediction of Alzheimer’s disease'
Ni Gao, Li-Xin Tao, Jian Huang, Feng Zhang, Xia Li, Finbarr O’Sullivan, Si-Peng Chen, Si-Jia Tian, Gehendra Mahara, Yan-Xia Luo, Qi Gao, Xiang-Tong Liu, Wei Wang, Zhi-Gang Liang, Xiu-Hua Guo (2018) 'Contourlet-based hippocampal magnetic resonance imaging texture features for multivariant classification and prediction of Alzheimer’s disease'. Metabolic Brain Disease, [Details]
(2014) 'An Analysis of Whole Body Tracer Kinetics in Dynamic PET Studies With Application to Image-Based Blood Input Function Extraction'
Huang, J,O'Sullivan, F (2014) 'An Analysis of Whole Body Tracer Kinetics in Dynamic PET Studies With Application to Image-Based Blood Input Function Extraction'. IEEE Transactions On Medical Imaging, 33 :1093-1108 [DOI] [Details]
(2012) 'Kinetic analysis of dynamic positron emission tomography data using open-source image processing and statistical inference tools'
D. Hawe and F. Hernandez Fernandez and L. O'Suilleabháin and E. Wolsztynski and J. Huang and F. O’Sullivan (2012) 'Kinetic analysis of dynamic positron emission tomography data using open-source image processing and statistical inference tools'. WIREs Computational Statistics, [Details]
(2012) 'Plane-wave Sf S reconstruction of water surface characteristics from Lambertian reflectance data'
Huang, J,O'Sullivan, F,Jike, L (2012) 'Plane-wave Sf S reconstruction of water surface characteristics from Lambertian reflectance data'. Inverse Problems, 28 [DOI] [Details]
(2009) 'Classification of array CGH data using smoothed logistic regression model'
Huang, J;Salim, A;Lei, KB;O'Sullivan, K;Pawitan, Y (2009) 'Classification of array CGH data using smoothed logistic regression model'. Statistics In Medicine, 28 :3798-3810 [DOI] [Details]
(2008) 'Regularized Reconstruction of Water Surfaces from Noisy Gradient Information using Plane Wave Superposition'
O'Sullivan, F., Huang, J., Roy Choudhury, K., Caulliez, G., Shrira, V.,; (2008) 'Regularized Reconstruction of Water Surfaces from Noisy Gradient Information using Plane Wave Superposition'. Inverse Problems, 24 (034016) [Details]
(2008) 'Retrospective analysis of chronic hepatitis C in untreated patients with nonlinear mixed effects model'
Jian Huang, Kathleen O’Sullivan, John Levis, Elizabeth Kenny-Walsh, Orla Crosbie, Liam Fanning (2008) 'Retrospective analysis of chronic hepatitis C in untreated patients with nonlinear mixed effects model'. J. Biomedical Science and Engineering, (1):85-90 [DOI] [Details]
(2008) 'Effect of pH and addition of corn oil on the properties of whey protein isolate-based films using response surface methodology'
Wang, L.; Liu, L.; Holmes, J. D.; Huang, J.; Kerry, J. F.; kerry, J. P.; (2008) 'Effect of pH and addition of corn oil on the properties of whey protein isolate-based films using response surface methodology'. International Journal of Food Science & Technology, 43 :787-796 [ Publisher's Version] [Details]
(2007) 'Robust smooth segmentation approach for array CGH data analysis'
Huang, J;Gusnanto, A;O'Sullivan, K;Staaf, J;Borg, A;Pawitan, Y (2007) 'Robust smooth segmentation approach for array CGH data analysis'. Bioinformatics, 23 :2463-2469 [DOI] [Details]
(2003) 'Constrained clustering of irregularly sampled spatial data'
Pawitan, Y,Huang, J; (2003) 'Constrained clustering of irregularly sampled spatial data'. Journal Of Statistical Computation And Simulation, 73 :853-865 [DOI] [Details]
(2003) 'Variable selection in random calibration of near-infrared instruments: ridge regression and partial least squares regression settings'
Gusnanto, A,Pawitan, Y,Huang, J,Lane, B (2003) 'Variable selection in random calibration of near-infrared instruments: ridge regression and partial least squares regression settings'. Journal of Chemometrics, 17 :174-185 [DOI] [Details]
(2002) 'A comparison of calibration methods based on calibration data size and robustness'
Huang, J;Brennan, D;Sattler, L;Alderman, J;Lane, B;O'Mathuna, C (2002) 'A comparison of calibration methods based on calibration data size and robustness'. Chemometrics and Intelligent Laboratory Systems, 62 :25-35 [Details]
(2002) 'Development of a micro-spectrometer system for process control application'
Brennan, D and Alderman, J and Sattler, L and Walshe, J and Huang, J and O'Connor, B and O'Mathuna, C (2002) 'Development of a micro-spectrometer system for process control application'. INFRARED PHYSICS \& TECHNOLOGY, 43 (2):69-76 [DOI] [Details]
(2000) 'Quasi-likelihood estimation of non-invertible moving average processes'
Huang, J,Pawitan, Y; (2000) 'Quasi-likelihood estimation of non-invertible moving average processes'. Scandinavian Journal of Statistics, 27 :689-702 [Details]
(1999) 'Consistent Estimation for Non-Gaussian Non-Causal Autoregessive Processes'
Jian, Huang and Pawitan, Yudi (1999) 'Consistent Estimation for Non-Gaussian Non-Causal Autoregessive Processes'. Journal of Time Series Analysis, 20 (4):417-423 [ Publisher's Version] [DOI] [Details]

Conference Publications

  Year Publication
(2025) Conference of Applied Statistics in Ireland
Wu Qi Jian Huang and Eric Wolsztynski (2025) Clustering-based deconvolution of brain CT perfusion data CASI abstract Conference of Applied Statistics in Ireland [Details]
(2024) CoMH Research Conference 2024
Qingyue Wang, Jian Huang, Yudi Pawitan, Trung Nghia Vu (2024) DECLUST: A cluster-based cell-type deconvolution of spatial transcriptomic data CoMH Research Conference 2024 [Details]
(2023) IEEE 11th Joint International Information Technology and Artificial Intelligence Conference (ITAIC)
ZiJian Bai and Jian Huang (2023) Non-uniform Fourier transform based rotational alignment in single-particle Cryo-EM IEEE 11th Joint International Information Technology and Artificial Intelligence Conference (ITAIC) [Details]
(2020) Joint Statistical Meetings (JSM)
Ran Ren, Jian Huang, Finbarr O’Sullivan, Tian Mou and Kevin O’Regan (2020) Quantification of Pixel-Wise Noise in Clinical Positron Emission Tomography (PET) Images Joint Statistical Meetings (JSM) [Details]
(2019) IEEE NSS/MIC/RTSD
Y. Hu J. Huang, M. Muzi, F. O'Sullivan (2019) Application of Mixture Analysis Tools from PET for Quantitation of Local Kinetics in DCE-MRI IEEE NSS/MIC/RTSD Manchester, [Details]
(2019) IEEE NSS&MIC
F Gu, Q Wu, F O’ Sullivan, J Huang, M Muzi and D A Mankoff. (2019) “An illustration of the use of model-based bootstrapping for evaluation of uncertainty in kinetic information derived from dynamic PET” IEEE NSS&MIC [Details]
(2019) The Royal Statistical Society Conference
XY.Meng, J.Huang, F.O’Sullivan, ZY.Xiu and L.O'Suilleabhán (2019) Parallel Computation for Seeded MDS Based on K-means Clustering The Royal Statistical Society Conference Belfast, [Details]
(2019) World Molecular Imaging Congress
Ran Ren, Jian Huang, Finbarr O’Sullivan, Tian Mou and Kevin O’Regan (2019) Assessment of Uncertainty in Diagnostic Information Recovered from Clinical PET/CT-FDG Scans: A Practically Feasible Image Domain Bootstrap Simulation Scheme World Molecular Imaging Congress [Details]
(2019) Conference on Applied Statistics in Ireland
R. Ren , J.Huang and Tomas. Kerry (2019) Analysis of Small-Area Migration in Ireland Conference on Applied Statistics in Ireland [Details]
(2018) Royal Statistics Society Annual Conference
XY.Meng, J.Huang, F.O’Sullivan, ZY.Xiu ,R.Ren L.O'Suilleabhán (2018) Seeded MDS Based on K-means Clustering Royal Statistics Society Annual Conference Cardiff, [Details]
(2018) Journal of Nuclear Medicine May 2018, 59 (supplement 1) 1738
Mou, T;Huang, J;O'Sullivan, F (2018) Statistical Analysis of the 3-D Imaging Characteristics of a PET Scanner: More Detailed Processing of Routine Quality Assurance Data Journal of Nuclear Medicine May 2018, 59 (supplement 1) 1738 [Details]
(2018) Royal Statistics Society International Conference
Xiu Z, Huang J, O’Sullivan J, Wolsztynski E, Dave M, O'Sullivan F (2018) Mixture Modelling for AIF Extraction from Dynamic PET Studies Royal Statistics Society International Conference [Details]
(2017) Conference on Applied Statistics in Ireland
T. Mou, J Huang, R. Ren, H. Li and F. O’Sullivan (2017) Empirical representation of the performance of an operational PET scanner Conference on Applied Statistics in Ireland [Details]
(2017) Joint Statistical Meetings
Tian Mou and Jian Huang and Finbarr O'Sullivan (2017) Implications for Gamma characteristic of reconstructed PET data Joint Statistical Meetings [Details]
(2017) ociety of Nuclear Medicine and Molecular Imaging Annual Meeting
Eric Wolsztynski, Tian Mou, Kevin O'Regan, Janet O'Sullivan, Nicola Hughes, Jian Huang and Finbarr O'Sullivan (2017) Model and texture-based characterizations of intratumoral heterogeneity in FDG-PET imaging of lung cancer Journal of Nuclear Medicine May 2017, 58 (supplement 1) 148 ociety of Nuclear Medicine and Molecular Imaging Annual Meeting [Details]
(2016) ICSA International Conference
T. Mou, J. Huang and F. O’Sullivan F (2016) An Examination of the Role of the Gamma Model in Approximating of the Distribution of Reconstructed PET Data ICSA International Conference [Details]
(2016) Royal statistical society international conference
T. Mou, J. Huang and F. O’Sullivan F. (2016) The role of the Gamma Distribution in representing Positron Emission Tomography measurements Royal statistical society international conference [Details]
(2016) Royal Statistical Society Annual Meeting
Z. Xiu, J. Huang, J. O'Sullivan, E. Wolsztynski, M.D. Mankoff, F. O'Sullivan (2016) Calibrating a whole-body circulation model for image-based AIF extraction in the context of blood flow-metabolism mismatch assessment in LABCa patients Royal Statistical Society Annual Meeting [Details]
(2016) J Clin Oncol 34 (suppl; abstr 11564), American Society of Clinical Oncology Annual Meeting
Hughes N, Mou T, O’Regan K, Murphy P, O’Sullivan J, Wolsztynski E, Huang J, Kennedy M, Eary JF, O’Sullivan F (2016) Prognostic value of tumor heterogeneity evaluated by FDG-PET/CT imaging in lung cancer patients J Clin Oncol 34 (suppl; abstr 11564), American Society of Clinical Oncology Annual Meeting Chicago, IL, [Details]
(2015) Journal of Nuclear Medicine 56 (supplement 3), 624-624
F O'Sullivan, J Huang, M Muzi, K Krohn (2015) A Patlak-guided approach to extracting AIF information from regions with significant tracer retention Journal of Nuclear Medicine 56 (supplement 3), 624-624 [Details]
(2015) Conference on Applied Statistics in Ireland
Francisco Hernandez , Sarah Murphy, Tian Mou, Eric Wolsztynski, Jian Huang, Finbarr O’Sullivan (2015) Recovery of Residue Function and Kinetic Analysis in an 11C-Verapamil PET Study: Compartmental vs Adaptive Mixture Models Conference on Applied Statistics in Ireland [Details]
(2015) Conference on Applied Statistics in Ireland
Murphy S, Wolsztynski E, Huang J, O’Sullivan J, Muzi M, Eary JF, Krohn K, O’Sullivan F (2015) Kinetic Analysis of 11C-Thymidine PET Imaging Studies of Malignant Brain Tumours Conference on Applied Statistics in Ireland [Details]
(2015) IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2015
Mou T.;Huang J.;Zhang Y.;Kinahan P.;O'Sullivan F. (2015) An improved statistical approach to the estimation of spatial bias and variability in reconstructed PET data IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2015 [DOI] [Details]
(2014) Journal of Nuclear Medicine May 2014, 55 (supplement 1) 431
Finbarr O'Sullivan, Janet O'Sullivan, Lisa Dunnwald, Mark Muzi, Jian Huang, Erin Schubert, Lanell Peterson, Robert Doot and David Mankoff (2014) Imaging tracer kinetics by mixtures of residues: An investigation in the context of dynamic PET studies with 15O-H2O (water) and 18F-FDG for locally advanced breast cancer Journal of Nuclear Medicine May 2014, 55 (supplement 1) 431 [Details]
(2014) Journal of Nuclear Medicine May 2014, 55 (supplement 1) 430
Finbarr O'Sullivan, Janet O'Sullivan, Lisa Dunnwald, Mark Muzi, Jian Huang, Erin Schubert, Lanell Peterson, Robert Doot and David Mankoff (2014) Automatic recovery of the arterial input function for PET imaging studies with water and FDG in locally advanced breast cancer patients Journal of Nuclear Medicine May 2014, 55 (supplement 1) 430 [Details]
(2014) 2014 IEEE NUCLEAR SCIENCE SYMPOSIUM AND MEDICAL IMAGING CONFERENCE (NSS/MIC)
Mou, T;Huang, J;Zhang, Y;Elston, B;Kinahan, P;Muzi, M;Opanowski, A;O'Sullivan, F (2014) Spatial Covariance Characteristics in a Collection of 3-D PET scanners used in Clinical Imaging Trials 2014 IEEE NUCLEAR SCIENCE SYMPOSIUM AND MEDICAL IMAGING CONFERENCE (NSS/MIC) [Details]
(2014) Journal of Nuclear Medicine May 2014, 55 (supplement 1) 2092;
Huang J, O’Sullivan F, Wolsztynski E, Muzi M and Krohn K (2014) A modified FBP algorithm for reconstruction of images when there are high activity regions in the field of view Journal of Nuclear Medicine May 2014, 55 (supplement 1) 2092; Seattle, WA, USA, [Details]
(2014) European Journal of Cancer, volume 50 (2014)
Hawe, D. Hernandez, F.R. Murphy, S. Wolsztynski, E. Huang, J. O'Sullivan, J. Muzi, M. Eary, J. Krohn, K. O'Sullivan, F. (2014) Statistical aspects of kinetic analysis of gliomas with FDG-PET European Journal of Cancer, volume 50 (2014) [Details]
(2013) 2013 IEEE NUCLEAR SCIENCE SYMPOSIUM AND MEDICAL IMAGING CONFERENCE (NSS/MIC)
Huang, J;Wolsztynski, E;Hawe, D;Kim, KM;Choudhury, KR;O'Sullivan, F (2013) A Cautionary Note on the use of Positivity Constrained Reconstructions for Quantification of Regional PET Imaging Data 2013 IEEE NUCLEAR SCIENCE SYMPOSIUM AND MEDICAL IMAGING CONFERENCE (NSS/MIC) [Details]
(2013) ADVANCED DESIGNS AND RESEARCHES FOR MANUFACTURING, PTS 1-3
Zhang, MS;Huang, J (2013) Quasi-likelihood Deconvolution of Non-Gaussian Non-invertible Moving Average Model ADVANCED DESIGNS AND RESEARCHES FOR MANUFACTURING, PTS 1-3 [DOI] [Details]
(2013) Society of Nuclear Medicine and Molecular Imaging Annual Meeting
O'Sullivan F, Huang J, Muzi M, Wolsztynski E, O’Sullivan J, Fink J, Rockhill J, Eary J, Krohn K (2013) Validation of an image derived blood time course extraction method for quantitation of dynamic PET [F-18]-Fluorothymidine (FLT) studies in brain cancer patients Society of Nuclear Medicine and Molecular Imaging Annual Meeting Vancouver, BC, Canada, [Details]
(2012) European Journal of Cancer 48(6):80
O'Sullivan, F;Muzi, M;Huang, J;Eary, JF;Link, J;Krohn, KA (2012) A Fully Automatic Procedure for Image Derived Blood Extraction, Including Assessment of Metabolite, in Dynamic PET Fluorothymidine (FLT) Studies European Journal of Cancer 48(6):80 [Details]
(2011) IEEE NUCLEAR SCIENCE SYMPOSIUM AND MEDICAL IMAGING CONFERENCE
Fernandez, FH,Hawe, D,O'Suilleabhain, L,Wolsztynski, E,Huang, J,Muzi, M,O'Sullivan, F, (2011) Kinetic analysis of dynamic 18F-FDG and 15O-H2O PET studies by parametric and nonparametric methods: A statistical analysis IEEE NUCLEAR SCIENCE SYMPOSIUM AND MEDICAL IMAGING CONFERENCE , pp.3823-3827 [Details]
(2011) Society of Nuclear Medicine Annual Meeting 2011, San Antonio, Texas, June 4-8
F. O'Sullivan and J. Huang and N. Fitzgerald and M. Muzi and K. Krohn (2011) A physiological model for representation of tracer activity in re-circulating venous and arterial blood Society of Nuclear Medicine Annual Meeting 2011, San Antonio, Texas, June 4-8 [Details]
(2011) IEEE Nuclear Science Symposium, Medical 23-29 October 2011, Valencia, Spain
J. Huang and F. O'Sullivan and J. N. O'Sullivan (2011) Representation of the Arterial Input Function using a Markov Chain Whole-Body Circulation Model IEEE Nuclear Science Symposium, Medical 23-29 October 2011, Valencia, Spain [Details]
(2011) IEEE Nuclear Science Symposium, Medical 23-29 October 2011, Valencia, Spain
D. Hawe and F. Hernandez Fernandez and J. Huang and M. Muzi and F. O’Sullivan (2011) Regional Kinetic Summaries of Dynamic PET Time- Course Data: Model the Average or Average the Model? IEEE Nuclear Science Symposium, Medical 23-29 October 2011, Valencia, Spain [Details]
(2010) IEEE 2010 Nuclear Science Symposium and Medical Imaging inproceedings, Knoxville, Tennessee , 30-OCT-10 - 06-NOV-10
N. Fitzgerald and F. O'Sullivan and J. Huang and M. Muzi and G. S. Newman and J. D. Unadkat and T. L. Richards and K. A. Krohn (2010) A Physiological Model for Representation of Arterial Tracer Concentration Time Courses in Dynamic Imaging Studies with CT, PET and MR IEEE 2010 Nuclear Science Symposium and Medical Imaging inproceedings, Knoxville, Tennessee , 30-OCT-10 - 06-NOV-10 [Details]
(2010) IEEE 2010 Nuclear Science Symposium and Medical Imaging inproceedings, Knoxville, Tennessee , 30-OCT-10 - 06-NOV-10
J. Huang and F. O'Sullivan and N. Fitzgerald and M. Muzi and D. Unadkat and K. A. Krohn (2010) Image Based Extraction of the Artieral Input Function in Cerebral PET Studies with O-15 Wate IEEE 2010 Nuclear Science Symposium and Medical Imaging inproceedings, Knoxville, Tennessee , 30-OCT-10 - 06-NOV-10 [Details]
(2010) CASI 2010, May, Portrush, North. Ireland
J. Huang and F. O'Sullivan (2010) Tomographic Reconstruction of Water Surface Characteristics from Lambertian Reflectance CASI 2010, May, Portrush, North. Ireland [Details]
(2008) 2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008
Huang J.;O'Sullivan K.;Kenny-Walsh E.;Crosbie O.;Levis J.;Fanning L. (2008) Nonlinear mixed effects modelling viral load in untreated patients with chronic hepatitis C 2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008 , pp.1189-1192 [DOI] [Details]
(2007) inproceedings of Applied Statistics in Ireland
S. O'Neill and J. Huang and K. O'Sullivan and C. von Gertten (2007) Statistical Significance in the Analysis of Gene Expression Data inproceedings of Applied Statistics in Ireland [Details]
(2007) inproceedings of Applied Statistics in Ireland
K. O'Sullivan and S. O'Neill, and J. O'Mullane, and J. Huang and M. Rea and D. Cadogan (2007) Central Composite Design Applied to Drug Production inproceedings of Applied Statistics in Ireland [Details]
(2006) CASI 2006 May, Killarney, Co. Kerry, Ireland
J. Huang and F. O’Sullivan and K. Roy Choudhury (2006) Reconstruction of Lambertian Surface via Ridge Function Expansions CASI 2006 May, Killarney, Co. Kerry, Ireland [Details]
(2006) 2nd Annual Interdisciplinary Conference
S. O’Neill, K. O’Sullivan and J. Huang, Christina von Gertten, Amilcar Flores Morales, Ann-Christin Sandberg Nordqvist (2006) Multiple Testing Issues in Gene Expression Data 2nd Annual Interdisciplinary Conference [Details]
(2006) Proceeding of Conference of 2nd Annual Interdisciplinary Conference
K. O’Sullivan, S. O’Neill, J. O’Mullane, J. Huang, M. Rea and D. Cadogen (2006) Response Surface Methodology Applied to Pharmaceutical Drug Production Proceeding of Conference of 2nd Annual Interdisciplinary Conference [Details]
(2006) Analysis of array CGH data: identification of genomic alteration regions
J. Huang and K. O'Sullivan and Y. Pawitan (2006) Analysis of array CGH data: identification of genomic alteration regions Analysis of array CGH data: identification of genomic alteration regions [Details]
(2005) Conference of European Network of Business and Industry Statistics
Jian Huang, Kathleen O’Sullivan, John Levis, Elizabeth Kenny-Walsh, Oral Crosbie and Liam Fanning (2005) Modelling Hepatitis C Viral Load Pattern Conference of European Network of Business and Industry Statistics [Details]
(2004) Conference of Applied Statistics in Ireland
J. Huang, F. O’Sullivan, J. O’Sullivan, M. Muzi and A. Spence (2004) Averaging of Region of Interest Data in Dynamic Imaging Studies: A Statistical Adjustment for Local Time Delays Associated with Transport Conference of Applied Statistics in Ireland [Details]
(2001) Proceedings of 23rd European Meeting of Statisticians
Jian Huang and Finbarr O’Sullivan (2001) Constrained Analysis with Application to SST Data Proceedings of 23rd European Meeting of Statisticians [Details]
(2001) Royal Statistician Society Conference
Y. Pawitan and J. Huang (2001) (2001) Image Segmentation Based On Irregularly Sampled Spatial Data Royal Statistician Society Conference [Details]
(2001) Conference of Applied Statistics in Ireland
J. Huang, D. Brennan, J. Alderman and B. Lane (2001) A new method of calibration model transfer in NIR spectroscopy Conference of Applied Statistics in Ireland [Details]
(2000) Conference of Applied Statistics in Ireland
J. Huang (2000) Rainfall Typology of Ireland Conference of Applied Statistics in Ireland [Details]
(1998) Conference of Applied Statistics in Ireland
F. O’Sullivan and J. Huang (1998) Analysis of patterns of variation in monthly sea surface temperature data Conference of Applied Statistics in Ireland [Details]
(1997) Conference of Applied Statistics in Ireland
J. Huang and Y. Pawitan (1997) Deconvolution of nonGaussian time series Conference of Applied Statistics in Ireland [Details]

Abstract

  Year Publication
(2025) Clustering-based deconvolution of brain CT perfusion data.
Qi Wu, Jian Huang and Eric Wolsztynski (2025) Clustering-based deconvolution of brain CT perfusion data. Abstract [Details]
(2024) DECLUST: A cluster-based cell-type deconvolution of spatial transcriptomic data.
Qingyue Wang, Jian Huang, Yudi Pawitan, Trung Nghia Vu (2024) DECLUST: A cluster-based cell-type deconvolution of spatial transcriptomic data. College of Medicine and Health Research Conference, UCC: Abstract [Details]
(2023) Non-uniform Fourier transform based rotational alignment in single-particle Cryo-EM.
Zijian Bai and Jian Huang (2023) Non-uniform Fourier transform based rotational alignment in single-particle Cryo-EM. Abstract [Details]
(2020) Quantification of Pixel-Wise Noise in Clinical Positron Emission Tomography (PET) Images.
Ran Ren, Jian Huang, Finbarr O'Sullivan, Tian Mou and Kevin O'Regan (2020) Quantification of Pixel-Wise Noise in Clinical Positron Emission Tomography (PET) Images. The Joint Statistical Meetings Annual Conference: Abstract [Details]
(2017) Model and texture-based characterizations of intratumoral heterogeneity in FDG-PET imaging of lung cancer.
Wolsztynski, E;Mou, T;O'Regan, K;O'Sullivan, J;Hughes, N;Huang, J;O'Sullivan, F (2017) Model and texture-based characterizations of intratumoral heterogeneity in FDG-PET imaging of lung cancer. RESTON: Abstract [Details]
(2016) Prognostic value of tumor heterogeneity evaluated by FDG-PET/CT imaging in lung cancer patients.
Hughes, NM;Mou, T;O'Regan, KN;Murphy, P;O'Sullivan, JN;Wolsztynski, E;Huang, J;Kennedy, M;Eary, JF;O'Sullivan, F (2016) Prognostic value of tumor heterogeneity evaluated by FDG-PET/CT imaging in lung cancer patients. ALEXANDRIA: Abstract [DOI] [Details]
(2016) Application of Gamma Statistics in the Analysis of Kinetic Models for Dynamic PET Time Course Data.
Huang, J;Mou, T;OSullivan, F (2016) Application of Gamma Statistics in the Analysis of Kinetic Models for Dynamic PET Time Course Data. RESTON: Abstract [Details]
(2015) A Patlak-guided approach to extracting AIF information from regions with significant tracer retention.
O'Sullivan, F;Huang, J;Muzi, M;Krohn, K (2015) A Patlak-guided approach to extracting AIF information from regions with significant tracer retention. RESTON: Abstract [Details]
(2014) Imaging tracer kinetics by mixtures of residues: An investigation in the context of dynamic PET studies with 15O-H2O (water) and 18F-FDG for locally advanced breast cancer.
O'Sullivan, F;O'Sullivan, J;Dunnwald, L;Muzi, M;Huang, J;Schubert, E;Peterson, L;Doot, R;Mankoff, D (2014) Imaging tracer kinetics by mixtures of residues: An investigation in the context of dynamic PET studies with 15O-H2O (water) and 18F-FDG for locally advanced breast cancer. RESTON: Abstract [Details]
(2014) Automatic recovery of the arterial input function for PET imaging studies with water and FDG in locally advanced breast cancer patients.
O'Sullivan, F;O'Sullivan, J;Dunnwald, L;Muzi, M;Huang, J;Schubert, E;Peterson, L;Doot, R;Mankoff, D (2014) Automatic recovery of the arterial input function for PET imaging studies with water and FDG in locally advanced breast cancer patients. RESTON: Abstract [Details]
(2012) A Fully Automatic Procedure for Image Derived Blood Extraction, Including Assessment of Metabolite, in Dynamic PET Fluorothymidine (FLT) Studies.
O'Sullivan, F;Muzi, M;Huang, J;Eary, JF;Link, J;Krohn, KA (2012) A Fully Automatic Procedure for Image Derived Blood Extraction, Including Assessment of Metabolite, in Dynamic PET Fluorothymidine (FLT) Studies. OXFORD: Abstract [Details]

Professional Associations

  Association Function From / To
Irish Statistical Association Member 05-MAY-97 /

Employment

  Employer Position From / To
University College Cork Post-doctoral Researcher 01-JUL-99 /
Fuling Teachers College, China Lecturer 01-MAR-87 / 01-SEP-93
Fuling Teachers College, China Teaching assistant 01-SEP-82 / 01-SEP-84
University College Cork Researcher/ Assistant Consultant Statistician 01-JUL-12 /
University College Cork Boole Fellow 01-JAN-98 / 30-JUN-99

Education

  Year Institution Qualification Subject
1982 Chongqing University, Chongqing, China BSC (HONS) Applied Mathematics
1987 North-Western Polytechnic University, Xian, China MSc Applied Statistics
1997 University College Dublin PHD Statistics

Outreach Activities

  Description

invited to give a talk at
Capital University Medical University, Beijing;

Beijing Technology and Business University, Beijing;

Chongqing University, Chongqing

South western University of Finance and Economics, Chengdu;

Civil Aviation University of China, Tianjin, etc.

Journal Activities

  Journal Role To / From
Biomedical Physics & Engineering Express Peer Reviewer -
Computers In Biology And Medicine Peer Reviewer -
European Journal Of Radiology Peer Reviewer -

Teaching Interests

ST4099 Research Project in Statistics
ST3053 Stochastic Modelling I
ST3066 Life Contingence I
ST3061 Statistical Theory
ST3092 Statistics Readings and Literature Review Workshop
ST4090 Current Topics in Statistics I
Introduction to Statistics (BTBU) 
Statistics with R (BTBU )
Mathematical Analysis (BTBU)